CDS 1 - 204
  /gene="1"
  /product="gp1"
  /function="Hypothetical Protein"
  /locus tag="Lila22_1"
    /note=Original Glimmer call @bp 1 has strength 3.77; Genemark calls start at 1
    /note=SSC: 1-204 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp001 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 8.08212E-43 GAP: 0 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.141, -4.325675514574479, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp001 [Gordonia phage Ranch] ],,YP_009852453,100.0,8.08212E-43 SIF-HHPRED:  SIF-Syn: 

CDS 201 - 1712
  /gene="2"
  /product="gp2"
  /function="terminase"
  /locus tag="Lila22_2"
    /note=Original Glimmer call @bp 201 has strength 11.55; Genemark calls start at 201
    /note=SSC: 201-1712 CP: no SCS: both ST: SS BLAST-Start: [terminase [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.034, -4.902637746059556, no F: terminase SIF-BLAST: ,,[terminase [Gordonia phage OtterstedtS21]],,UVT31168,100.0,0.0 SIF-HHPRED: Large subunit terminase; large terminase, VIRAL PROTEIN; 2.2A {Deep-sea thermophilic phage D6E},,,5OE8_A,93.6382,100.0 SIF-Syn: 
    /note=Only one terminase so far - check for more

CDS 1709 - 3331
  /gene="3"
  /product="gp3"
  /function="portal protein"
  /locus tag="Lila22_3"
    /note=Original Glimmer call @bp 1709 has strength 12.62; Genemark calls start at 1709
    /note=SSC: 1709-3331 CP: yes SCS: both ST: SS BLAST-Start: [portal protein [Gordonia phage Jalebi]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.821, -5.06189390351663, no F: portal protein SIF-BLAST: ,,[portal protein [Gordonia phage Jalebi]],,UJQ86696,99.6296,0.0 SIF-HHPRED: Portal protein; Bacteriophage, SPP1, Portal Protein, Head completion proteins, Connector Complex, DNA Channel, VIRAL PROTEIN; 2.7A {Bacillus subtilis},,,7Z4W_D,85.5556,100.0 SIF-Syn: 

CDS 3409 - 4914
  /gene="4"
  /product="gp4"
  /function="esterase"
  /locus tag="Lila22_4"
    /note=Original Glimmer call @bp 3409 has strength 8.84; Genemark calls start at 3409
    /note=SSC: 3409-4914 CP: yes SCS: both ST: SS BLAST-Start: [tail protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 44.511% 3.31184E-61 GAP: 77 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.735, -3.5985503360675457, no F: esterase SIF-BLAST: ,,[tail protein [Gordonia phage Gibbin] ],,YP_009852357,25.3521,3.31184E-61 SIF-HHPRED:  SIF-Syn: 
    /note=other members of cluster call it esterase

CDS 4914 - 5624
  /gene="5"
  /product="gp5"
  /function="Hypothetical Protein"
  /locus tag="Lila22_5"
    /note=Original Glimmer call @bp 4914 has strength 8.7; Genemark calls start at 4914
    /note=SSC: 4914-5624 CP: yes SCS: both ST: NA BLAST-Start:  GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.014, -5.421956680573674, no F: Hypothetical Protein SIF-BLAST:  SIF-HHPRED:  SIF-Syn: 
    /note=Unsure, no blast and not showing in other DV viruses

CDS 5858 - 6160
  /gene="6"
  /product="gp6"
  /function="Hypothetical Protein"
  /locus tag="Lila22_6"
    /note=Original Glimmer call @bp 5858 has strength 1.13; Genemark calls start at 5858
    /note=SSC: 5858-6160 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_PATOS_7 [Gordonia phage Patos]],,NCBI, q1:s1 100.0% 3.72467E-47 GAP: 233 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.47, -5.821000469731741, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PATOS_7 [Gordonia phage Patos]],,UVT31794,95.0,3.72467E-47 SIF-HHPRED:  SIF-Syn: 

CDS 6163 - 6525
  /gene="7"
  /product="gp7"
  /function="Hypothetical Protein"
  /locus tag="Lila22_7"
    /note=Original Glimmer call @bp 6163 has strength 12.51; Genemark calls start at 6163
    /note=SSC: 6163-6525 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp07 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 6.51309E-72 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.355, -4.701320725655571, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp07 [Gordonia phage Gibbin] ],,YP_009852360,99.1667,6.51309E-72 SIF-HHPRED:  SIF-Syn: 

CDS 6525 - 7178
  /gene="8"
  /product="gp8"
  /function="Hypothetical Protein"
  /locus tag="Lila22_8"
    /note=Original Glimmer call @bp 6525 has strength 6.74; Genemark calls start at 6525
    /note=SSC: 6525-7178 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp08 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 5.43368E-147 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.784, -3.7960205838585104, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp08 [Gordonia phage Gibbin] ],,YP_009852361,100.0,5.43368E-147 SIF-HHPRED:  SIF-Syn: 

CDS 7178 - 8287
  /gene="9"
  /product="gp9"
  /function="Hypothetical Protein"
  /locus tag="Lila22_9"
    /note=Original Glimmer call @bp 7178 has strength 7.5; Genemark calls start at 7178
    /note=SSC: 7178-8287 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC71_gp08 [Gordonia phage Sadboi] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.876, -5.711975353186392, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC71_gp08 [Gordonia phage Sadboi] ],,YP_009852659,98.1132,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 8300 - 8548
  /gene="10"
  /product="gp10"
  /function="Hypothetical Protein"
  /locus tag="Lila22_10"
    /note=Original Glimmer call @bp 8300 has strength 3.04; Genemark calls start at 8294
    /note=SSC: 8300-8548 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein HWC68_gp10 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 2.81505E-51 GAP: 12 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.276, -2.0720764396375664, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp10 [Gordonia phage Gibbin] ],,YP_009852363,100.0,2.81505E-51 SIF-HHPRED:  SIF-Syn: 

CDS 8548 - 9420
  /gene="11"
  /product="gp11"
  /function="Hypothetical Protein"
  /locus tag="Lila22_11"
    /note=Original Glimmer call @bp 8548 has strength 9.23; Genemark calls start at 8548
    /note=SSC: 8548-9420 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp010 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.131, -4.487636275856737, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp010 [Gordonia phage Ranch] ],,YP_009852462,100.0,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 9462 - 9911
  /gene="12"
  /product="gp12"
  /function="metalloprotease"
  /locus tag="Lila22_12"
    /note=Genemark calls start at 9462
    /note=SSC: 9462-9911 CP: yes SCS: genemark ST: SS BLAST-Start: [tail protein [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 5.31549E-103 GAP: 41 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.583, -4.2219893161307915, no F: metalloprotease SIF-BLAST: ,,[tail protein [Gordonia phage Ranch] ],,YP_009852463,98.6577,5.31549E-103 SIF-HHPRED: JAMM1; JAMM/MPN+, metalloprotease, isopeptidase, deubiquitination, hydrolase; 1.733A {Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)},,,2KCQ_A,87.9195,99.8 SIF-Syn: 

CDS 9823 - 10770
  /gene="13"
  /product="gp13"
  /function="minor capsid protein"
  /locus tag="Lila22_13"
    /note=Original Glimmer call @bp 9823 has strength 6.09; Genemark calls start at 10003
    /note=SSC: 9823-10770 CP: no SCS: both-gl ST: SS BLAST-Start: [minor capsid protein [Gordonia phage BirthdayBoy]],,NCBI, q1:s1 100.0% 0.0 GAP: -89 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.735, -3.0713502170045657, yes F: minor capsid protein SIF-BLAST: ,,[minor capsid protein [Gordonia phage BirthdayBoy]],,WNM65954,99.3651,0.0 SIF-HHPRED: Phage_min_cap2 ; Phage minor capsid protein 2,,,PF06152.15,80.3175,99.9 SIF-Syn: 

CDS 10796 - 11587
  /gene="14"
  /product="gp14"
  /function="scaffolding protein"
  /locus tag="Lila22_14"
    /note=Original Glimmer call @bp 10742 has strength 16.38; Genemark calls start at 10796
    /note=SSC: 10796-11587 CP: yes SCS: both-gm ST: NI BLAST-Start: [head scaffolding protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 6.23616E-180 GAP: 25 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.643, -3.2669815101762634, no F: scaffolding protein SIF-BLAST: ,,[head scaffolding protein [Gordonia phage Gibbin] ],,YP_009852367,99.2366,6.23616E-180 SIF-HHPRED:  SIF-Syn: 

CDS 11608 - 11997
  /gene="15"
  /product="gp15"
  /function="minor capsid protein"
  /locus tag="Lila22_15"
    /note=Original Glimmer call @bp 11608 has strength 13.9; Genemark calls start at 11608
    /note=SSC: 11608-11997 CP: yes SCS: both ST: NI BLAST-Start: [hypothetical protein HWC68_gp15 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.29349E-84 GAP: 20 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.74, -3.123974469270304, yes F: minor capsid protein SIF-BLAST: ,,[hypothetical protein HWC68_gp15 [Gordonia phage Gibbin] ],,YP_009852368,100.0,1.29349E-84 SIF-HHPRED:  SIF-Syn: 

CDS 12012 - 13199
  /gene="16"
  /product="gp16"
  /function="major capsid protein"
  /locus tag="Lila22_16"
    /note=Original Glimmer call @bp 12012 has strength 11.7; Genemark calls start at 12021
    /note=SSC: 12012-13199 CP: yes SCS: both-gl ST: NI BLAST-Start: [major capsid protein [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 0.0 GAP: 14 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.016, -2.6197685047743655, yes F: major capsid protein SIF-BLAST: ,,[major capsid protein [Gordonia phage ParvusTarda]],,UVT30996,99.7468,0.0 SIF-HHPRED: Gp27 major capsid protein; phage G, major capsid protein, decoration protein, capsid, icosahedral, gp26, gp27, VIRUS; 6.1A {Bacillus virus G},,,6WKK_F,83.7975,97.6 SIF-Syn: 

CDS 13201 - 13602
  /gene="17"
  /product="gp17"
  /function="Hypothetical Protein"
  /locus tag="Lila22_17"
    /note=Original Glimmer call @bp 13201 has strength 16.48; Genemark calls start at 13201
    /note=SSC: 13201-13602 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp17 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 5.45591E-89 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.956, -4.777812833192415, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp17 [Gordonia phage Gibbin] ],,YP_009852370,100.0,5.45591E-89 SIF-HHPRED:  SIF-Syn: 

CDS 13734 - 14045
  /gene="18"
  /product="gp18"
  /function="Hypothetical Protein"
  /locus tag="Lila22_18"
    /note=Original Glimmer call @bp 13734 has strength 8.66; Genemark calls start at 13734
    /note=SSC: 13734-14045 CP: yes SCS: both ST: NA BLAST-Start: [hypothetical protein HWC68_gp19 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.74986E-68 GAP: 131 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.694, -3.221100372932034, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp19 [Gordonia phage Gibbin] ],,YP_009852372,100.0,1.74986E-68 SIF-HHPRED:  SIF-Syn: 

CDS 14042 - 14419
  /gene="19"
  /product="gp19"
  /function="head-to-tail stopper"
  /locus tag="Lila22_19"
    /note=Original Glimmer call @bp 14042 has strength 9.87; Genemark calls start at 14042
    /note=SSC: 14042-14419 CP: yes SCS: both ST: NA BLAST-Start: [head-to-tail stopper [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 7.87005E-81 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.933, -4.904754965500383, no F: head-to-tail stopper SIF-BLAST: ,,[head-to-tail stopper [Gordonia phage Gibbin] ],,YP_009852373,96.8,7.87005E-81 SIF-HHPRED: Head completion protein; Myoviridae, Phage, 6-fold neck region, VIRAL PROTEIN;{Vibrio phage XM1},,,7KJK_B4,96.0,98.0 SIF-Syn: 
    /note=HHPRED contains alignment to crystal structure SPP1 16

CDS 14409 - 14762
  /gene="20"
  /product="gp20"
  /function="minor capsid protein"
  /locus tag="Lila22_20"
    /note=Original Glimmer call @bp 14409 has strength 8.04; Genemark calls start at 14409
    /note=SSC: 14409-14762 CP: yes SCS: both ST: SS BLAST-Start: [minor capsid protein [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 2.07951E-81 GAP: -11 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.964, -5.049507594900835, no F: minor capsid protein SIF-BLAST: ,,[minor capsid protein [Gordonia phage Ranch] ],,YP_009852472,100.0,2.07951E-81 SIF-HHPRED:  SIF-Syn: 

CDS 14762 - 15190
  /gene="21"
  /product="gp21"
  /function="tail terminator"
  /locus tag="Lila22_21"
    /note=Original Glimmer call @bp 14762 has strength 10.28; Genemark calls start at 14762
    /note=SSC: 14762-15190 CP: no SCS: both ST: SS BLAST-Start: [tail terminator [Gordonia phage Wojtek]],,NCBI, q1:s1 100.0% 5.92998E-98 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.81, -5.851343805217333, no F: tail terminator SIF-BLAST: ,,[tail terminator [Gordonia phage Wojtek]],,UJQ86349,100.0,5.92998E-98 SIF-HHPRED:  SIF-Syn: 

CDS 15220 - 15648
  /gene="22"
  /product="gp22"
  /function="Hypothetical Protein"
  /locus tag="Lila22_22"
    /note=Original Glimmer call @bp 15220 has strength 15.42; Genemark calls start at 15220
    /note=SSC: 15220-15648 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp22 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 4.07297E-99 GAP: 29 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.814, -2.9670520441447894, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp22 [Gordonia phage Lambo] ],,YP_009852575,100.0,4.07297E-99 SIF-HHPRED:  SIF-Syn: 

CDS complement (15637 - 15804)
  /gene="23"
  /product="gp23"
  /function="Hypothetical Protein"
  /locus tag="Lila22_23"
    /note=Original Glimmer call @bp 15804 has strength 1.21
    /note=SSC: 15804-15637 CP: no SCS: glimmer ST: SS BLAST-Start:  GAP: 21 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.13, -5.399187552617544, no F: Hypothetical Protein SIF-BLAST:  SIF-HHPRED:  SIF-Syn: 
    /note=Might not be a gene.

CDS 15826 - 16683
  /gene="24"
  /product="gp24"
  /function="major tail protein"
  /locus tag="Lila22_24"
    /note=Original Glimmer call @bp 15826 has strength 14.4; Genemark calls start at 15826
    /note=SSC: 15826-16683 CP: yes SCS: both ST: SS BLAST-Start: [major tail protein [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 0.0 GAP: 21 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.76, -3.099505556436281, yes F: major tail protein SIF-BLAST: ,,[major tail protein [Gordonia phage ParvusTarda]],,UVT31005,100.0,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 16727 - 17203
  /gene="25"
  /product="gp25"
  /function="Hypothetical Protein"
  /locus tag="Lila22_25"
    /note=Original Glimmer call @bp 16727 has strength 11.36; Genemark calls start at 16727
    /note=SSC: 16727-17203 CP: yes SCS: both ST: SS BLAST-Start: [tail assembly chaperone [Gordonia phage Yikes] ],,NCBI, q1:s1 100.0% 6.54861E-108 GAP: 43 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.033, -2.442961286954254, yes F: Hypothetical Protein SIF-BLAST: ,,[tail assembly chaperone [Gordonia phage Yikes] ],,YP_009853980,100.0,6.54861E-108 SIF-HHPRED:  SIF-Syn: 
    /note=Possible Tail assembly chaperone

CDS 17190 - 17528
  /gene="26"
  /product="gp26"
  /function="Hypothetical Protein"
  /locus tag="Lila22_26"
    /note=Original Glimmer call @bp 17190 has strength 4.1; Genemark calls start at 17190
    /note=SSC: 17190-17528 CP: yes SCS: both ST: SS BLAST-Start: [tail assembly chaperone [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 6.86718E-75 GAP: -14 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.615, -7.040045906381115, no F: Hypothetical Protein SIF-BLAST: ,,[tail assembly chaperone [Gordonia phage Gibbin] ],,YP_009852380,100.0,6.86718E-75 SIF-HHPRED:  SIF-Syn: 
    /note=Possible Tail Assemble Chaperone

CDS 17521 - 24735
  /gene="27"
  /product="gp27"
  /function="tape measure protein"
  /locus tag="Lila22_27"
    /note=Original Glimmer call @bp 17521 has strength 9.48; Genemark calls start at 17521
    /note=SSC: 17521-24735 CP: no SCS: both ST: SS BLAST-Start: [tail length tape measure protein [Gordonia phage Yikes] ],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.361, -4.512227065926137, no F: tape measure protein SIF-BLAST: ,,[tail length tape measure protein [Gordonia phage Yikes] ],,YP_009853982,99.2917,0.0 SIF-HHPRED: Tape Measure Protein, gp57; phage tail, tail tip, tape measure protein, VIRAL PROTEIN; 3.7A {Staphylococcus virus 80alpha},,,6V8I_CF,11.1481,99.7 SIF-Syn: 

CDS 24732 - 25595
  /gene="28"
  /product="gp28"
  /function="minor tail protein"
  /locus tag="Lila22_28"
    /note=Original Glimmer call @bp 24732 has strength 11.68; Genemark calls start at 24732
    /note=SSC: 24732-25595 CP: no SCS: both ST: SS BLAST-Start: [minor tail protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.19, -2.7645180226256008, yes F: minor tail protein SIF-BLAST: ,,[minor tail protein [Gordonia phage Gibbin] ],,YP_009852382,100.0,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 25623 - 26735
  /gene="29"
  /product="gp29"
  /function="minor tail protein"
  /locus tag="Lila22_29"
    /note=Original Glimmer call @bp 25623 has strength 13.2; Genemark calls start at 25623
    /note=SSC: 25623-26735 CP: no SCS: both ST: SS BLAST-Start: [minor tail protein [Gordonia phage Yikes] ],,NCBI, q1:s5 100.0% 0.0 GAP: 27 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.142, -4.386088199995375, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Gordonia phage Yikes] ],,YP_009853984,98.9305,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 26738 - 28717
  /gene="30"
  /product="gp30"
  /function="minor tail protein"
  /locus tag="Lila22_30"
    /note=Original Glimmer call @bp 26738 has strength 6.3; Genemark calls start at 26738
    /note=SSC: 26738-28717 CP: no SCS: both ST: SS BLAST-Start: [minor tail protein [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 0.0 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.549, -6.402577003117836, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Gordonia phage Lambo] ],,YP_009852583,99.2413,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 28792 - 29322
  /gene="31"
  /product="gp31"
  /function="Hypothetical Protein"
  /locus tag="Lila22_31"
    /note=Original Glimmer call @bp 28792 has strength 2.45; Genemark calls start at 28717
    /note=SSC: 28792-29322 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein WOJTEK_30 [Gordonia phage Wojtek]],,NCBI, q1:s26 100.0% 3.91158E-82 GAP: 74 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.727, -5.726470621079688, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein WOJTEK_30 [Gordonia phage Wojtek]],,UJQ86359,83.5821,3.91158E-82 SIF-HHPRED:  SIF-Syn: 

CDS 29332 - 29499
  /gene="32"
  /product="gp32"
  /function="Hypothetical Protein"
  /locus tag="Lila22_32"
    /note=Original Glimmer call @bp 29332 has strength 6.62; Genemark calls start at 29332
    /note=SSC: 29332-29499 CP: no SCS: both ST: SS BLAST-Start: [membrane protein [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 4.16715E-31 GAP: 9 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.141, -4.325675514574479, yes F: Hypothetical Protein SIF-BLAST: ,,[membrane protein [Gordonia phage Lambo] ],,YP_009852585,100.0,4.16715E-31 SIF-HHPRED:  SIF-Syn: 

CDS 29496 - 30542
  /gene="33"
  /product="gp33"
  /function="Hypothetical Protein"
  /locus tag="Lila22_33"
    /note=Original Glimmer call @bp 29496 has strength 6.14; Genemark calls start at 29631
    /note=SSC: 29496-30542 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_33 [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.355, -5.479471976039214, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_33 [Gordonia phage ParvusTarda]],,UVT31014,97.7011,0.0 SIF-HHPRED:  SIF-Syn: 
    /note=shows up as minor tail in other clusters, but none in DV and BLAST with good e-values also say hypothetical

CDS 30559 - 30924
  /gene="34"
  /product="gp34"
  /function="Hypothetical Protein"
  /locus tag="Lila22_34"
    /note=Original Glimmer call @bp 30559 has strength 6.75; Genemark calls start at 30559
    /note=SSC: 30559-30924 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp34 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 8.16663E-79 GAP: 16 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.165, -4.274735973818826, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp34 [Gordonia phage Lambo] ],,YP_009852587,99.1736,8.16663E-79 SIF-HHPRED:  SIF-Syn: 

CDS 30927 - 31160
  /gene="35"
  /product="gp35"
  /function="Hypothetical Protein"
  /locus tag="Lila22_35"
    /note=Original Glimmer call @bp 30927 has strength 11.62; Genemark calls start at 30927
    /note=SSC: 30927-31160 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp035 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 3.86453E-47 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.88, -2.827683592113848, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp035 [Gordonia phage Ranch] ],,YP_009852487,100.0,3.86453E-47 SIF-HHPRED:  SIF-Syn: 

CDS 31199 - 32305
  /gene="36"
  /product="gp36"
  /function="lysin A"
  /locus tag="Lila22_36"
    /note=Original Glimmer call @bp 31199 has strength 11.06; Genemark calls start at 31199
    /note=SSC: 31199-32305 CP: yes SCS: both ST: SS BLAST-Start: [endolysin [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 0.0 GAP: 38 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.186, -4.229395370396053, no F: lysin A SIF-BLAST: ,,[endolysin [Gordonia phage Lambo] ],,YP_009852589,99.7283,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 32316 - 32585
  /gene="37"
  /product="gp37"
  /function="membrane protein"
  /locus tag="Lila22_37"
    /note=Original Glimmer call @bp 32316 has strength 8.38; Genemark calls start at 32316
    /note=SSC: 32316-32585 CP: yes SCS: both ST: SS BLAST-Start: [membrane protein [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 6.62278E-54 GAP: 10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.373, -3.898968357315439, no F: membrane protein SIF-BLAST: ,,[membrane protein [Gordonia phage ParvusTarda]],,UVT31018,100.0,6.62278E-54 SIF-HHPRED:  SIF-Syn: 

CDS 32585 - 32857
  /gene="38"
  /product="gp38"
  /function="Hypothetical Protein"
  /locus tag="Lila22_38"
    /note=Original Glimmer call @bp 32585 has strength 7.44; Genemark calls start at 32585
    /note=SSC: 32585-32857 CP: no SCS: both ST: SS BLAST-Start: [membrane protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 3.55254E-55 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 0.956, -6.90455460915451, no F: Hypothetical Protein SIF-BLAST: ,,[membrane protein [Gordonia phage Gibbin] ],,YP_009852392,100.0,3.55254E-55 SIF-HHPRED:  SIF-Syn: 

CDS 32857 - 33051
  /gene="39"
  /product="gp39"
  /function="Hypothetical Protein"
  /locus tag="Lila22_39"
    /note=Original Glimmer call @bp 32857 has strength 4.42; Genemark calls start at 32857
    /note=SSC: 32857-33051 CP: yes SCS: both ST: SS BLAST-Start: [membrane protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.488E-38 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.033, -3.095100142625534, yes F: Hypothetical Protein SIF-BLAST: ,,[membrane protein [Gordonia phage Gibbin] ],,YP_009852393,100.0,1.488E-38 SIF-HHPRED:  SIF-Syn: 

CDS 33048 - 33443
  /gene="40"
  /product="gp40"
  /function="Hypothetical Protein"
  /locus tag="Lila22_40"
    /note=Original Glimmer call @bp 33249 has strength 0.75; Genemark calls start at 33048
    /note=SSC: 33048-33443 CP: no SCS: both-gm ST: NI BLAST-Start: [membrane protein [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 4.9665E-89 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.718, -3.1085431521568267, yes F: Hypothetical Protein SIF-BLAST: ,,[membrane protein [Gordonia phage ParvusTarda]],,UVT31021,99.2366,4.9665E-89 SIF-HHPRED:  SIF-Syn: 

CDS 33740 - 34183
  /gene="41"
  /product="gp41"
  /function="Hypothetical Protein"
  /locus tag="Lila22_41"
    /note=Original Glimmer call @bp 33740 has strength 2.61; Genemark calls start at 33740
    /note=SSC: 33740-34183 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp041 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 3.93429E-71 GAP: 296 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.937, -2.7254235724530456, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp041 [Gordonia phage Ranch] ],,YP_009852493,96.4286,3.93429E-71 SIF-HHPRED:  SIF-Syn: 

CDS 34313 - 34510
  /gene="42"
  /product="gp42"
  /function="Hypothetical Protein"
  /locus tag="Lila22_42"
    /note=Genemark calls start at 34313
    /note=SSC: 34313-34510 CP: no SCS: genemark ST: SS BLAST-Start: [hypothetical protein HWC69_gp042 [Gordonia phage Ranch] ],,NCBI, q1:s1 95.3846% 9.59539E-36 GAP: 129 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.508, -3.6129949472896743, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp042 [Gordonia phage Ranch] ],,YP_009852494,96.875,9.59539E-36 SIF-HHPRED:  SIF-Syn: 
    /note=May not be a gene, there are hits, but not many and there is only one suggested start (and glimmer does not call at all)

CDS 34503 - 34805
  /gene="43"
  /product="gp43"
  /function="Hypothetical Protein"
  /locus tag="Lila22_43"
    /note=Original Glimmer call @bp 34503 has strength 1.63; Genemark calls start at 34503
    /note=SSC: 34503-34805 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp043 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 2.06129E-68 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.88, -3.4175091270247986, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp043 [Gordonia phage Ranch] ],,YP_009852495,100.0,2.06129E-68 SIF-HHPRED:  SIF-Syn: 
    /note=Glimmer score is low
    /note=low genemark coding potential

CDS 34811 - 35011
  /gene="44"
  /product="gp44"
  /function="Hypothetical Protein"
  /locus tag="Lila22_44"
    /note=Original Glimmer call @bp 34811 has strength 2.4; Genemark calls start at 34811
    /note=SSC: 34811-35011 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp43 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 7.60287E-41 GAP: 5 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.389, -4.153889419747202, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp43 [Gordonia phage Lambo] ],,YP_009852596,100.0,7.60287E-41 SIF-HHPRED:  SIF-Syn: 

CDS 35107 - 35499
  /gene="45"
  /product="gp45"
  /function="Hypothetical Protein"
  /locus tag="Lila22_45"
    /note=Original Glimmer call @bp 35107 has strength 6.79; Genemark calls start at 35107
    /note=SSC: 35107-35499 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_OTTERSTEDTS21_43 [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 4.12544E-89 GAP: 95 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.165, -4.354778061539587, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_OTTERSTEDTS21_43 [Gordonia phage OtterstedtS21]],,UVT31206,99.2308,4.12544E-89 SIF-HHPRED:  SIF-Syn: 
    /note=HNH within 30 nucleotides but no other evidence

CDS 35599 - 36036
  /gene="46"
  /product="gp46"
  /function="Hypothetical Protein"
  /locus tag="Lila22_46"
    /note=Original Glimmer call @bp 35599 has strength 10.11; Genemark calls start at 35611
    /note=SSC: 35599-36036 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein HWC70_gp44 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 5.26505E-100 GAP: 99 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.016, -2.4787699911121788, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp44 [Gordonia phage Lambo] ],,YP_009852597,99.3103,5.26505E-100 SIF-HHPRED:  SIF-Syn: 

CDS 36125 - 36226
  /gene="47"
  /product="gp47"
  /function="membrane protein"
  /locus tag="Lila22_47"
    /note=Genemark calls start at 36125
    /note=SSC: 36125-36226 CP: yes SCS: genemark ST: SS BLAST-Start: [membrane protein [Gordonia phage Genamy16] ],,NCBI, q1:s1 96.9697% 8.01768E-13 GAP: 88 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.085, -4.522223171366678, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Gordonia phage Genamy16] ],,UVF61568,68.0851,8.01768E-13 SIF-HHPRED:  SIF-Syn: 

CDS 36282 - 36560
  /gene="48"
  /product="gp48"
  /function="Hypothetical Protein"
  /locus tag="Lila22_48"
    /note=Original Glimmer call @bp 36282 has strength 6.74; Genemark calls start at 36282
    /note=SSC: 36282-36560 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp48 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 5.88557E-59 GAP: 55 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.967, -2.5823297389851954, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp48 [Gordonia phage Gibbin] ],,YP_009852401,100.0,5.88557E-59 SIF-HHPRED:  SIF-Syn: 

CDS 36604 - 37005
  /gene="49"
  /product="gp49"
  /function="Hypothetical Protein"
  /locus tag="Lila22_49"
    /note=Original Glimmer call @bp 36604 has strength 9.06; Genemark calls start at 36604
    /note=SSC: 36604-37005 CP: yes SCS: both ST: SS BLAST-Start: [membrane protein [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 5.81617E-94 GAP: 43 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.893, -5.3758041804753205, no F: Hypothetical Protein SIF-BLAST: ,,[membrane protein [Gordonia phage ParvusTarda]],,UVT31028,100.0,5.81617E-94 SIF-HHPRED:  SIF-Syn: 

CDS 37131 - 37397
  /gene="50"
  /product="gp50"
  /function="Hypothetical Protein"
  /locus tag="Lila22_50"
    /note=Original Glimmer call @bp 37131 has strength 8.23; Genemark calls start at 37131
    /note=SSC: 37131-37397 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC82_gp50 [Gordonia phage Yikes] ],,NCBI, q1:s1 100.0% 2.82683E-57 GAP: 125 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.978, -2.6395089437464523, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC82_gp50 [Gordonia phage Yikes] ],,YP_009854004,100.0,2.82683E-57 SIF-HHPRED:  SIF-Syn: 

CDS 37402 - 38262
  /gene="51"
  /product="gp51"
  /function="Hypothetical Protein"
  /locus tag="Lila22_51"
    /note=Original Glimmer call @bp 37402 has strength 11.23; Genemark calls start at 37402
    /note=SSC: 37402-38262 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_OTTERSTEDTS21_49 [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 0.0 GAP: 4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.624, -3.4470622626190464, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_OTTERSTEDTS21_49 [Gordonia phage OtterstedtS21]],,UVT31212,98.951,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 38264 - 38575
  /gene="52"
  /product="gp52"
  /function="Hypothetical Protein"
  /locus tag="Lila22_52"
    /note=Original Glimmer call @bp 38264 has strength 8.5; Genemark calls start at 38264
    /note=SSC: 38264-38575 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp052 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 1.21407E-69 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.597, -3.44341866013087, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp052 [Gordonia phage Ranch] ],,YP_009852504,100.0,1.21407E-69 SIF-HHPRED:  SIF-Syn: 

CDS 38575 - 39018
  /gene="53"
  /product="gp53"
  /function="Hypothetical Protein"
  /locus tag="Lila22_53"
    /note=Original Glimmer call @bp 38575 has strength 11.88; Genemark calls start at 38575
    /note=SSC: 38575-39018 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp053 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 9.29006E-100 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.933, -4.904754965500383, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp053 [Gordonia phage Ranch] ],,YP_009852505,97.9592,9.29006E-100 SIF-HHPRED:  SIF-Syn: 

CDS 39018 - 39227
  /gene="54"
  /product="gp54"
  /function="Hypothetical Protein"
  /locus tag="Lila22_54"
    /note=Original Glimmer call @bp 39018 has strength 3.41; Genemark calls start at 39018
    /note=SSC: 39018-39227 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp054 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 1.2541E-44 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.565, -3.5719506502182776, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp054 [Gordonia phage Ranch] ],,YP_009852506,100.0,1.2541E-44 SIF-HHPRED:  SIF-Syn: 

CDS 39208 - 39465
  /gene="55"
  /product="gp55"
  /function="Hypothetical Protein"
  /locus tag="Lila22_55"
    /note=Original Glimmer call @bp 39208 has strength 10.43; Genemark calls start at 39208
    /note=SSC: 39208-39465 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp53 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 1.04315E-57 GAP: -20 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.803, -5.179076951654137, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp53 [Gordonia phage Lambo] ],,YP_009852606,100.0,1.04315E-57 SIF-HHPRED:  SIF-Syn: 

CDS 39553 - 39777
  /gene="56"
  /product="gp56"
  /function="Hypothetical Protein"
  /locus tag="Lila22_56"
    /note=Original Glimmer call @bp 39553 has strength 16.24; Genemark calls start at 39553
    /note=SSC: 39553-39777 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp57 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.67626E-46 GAP: 87 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.614, -3.389881189012514, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp57 [Gordonia phage Gibbin] ],,YP_009852410,100.0,1.67626E-46 SIF-HHPRED:  SIF-Syn: 

CDS 39790 - 40269
  /gene="57"
  /product="gp57"
  /function="Hypothetical Protein"
  /locus tag="Lila22_57"
    /note=Original Glimmer call @bp 39790 has strength 9.78; Genemark calls start at 39790
    /note=SSC: 39790-40269 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp58 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 8.21899E-114 GAP: 12 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.276, -2.0720764396375664, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp58 [Gordonia phage Gibbin] ],,YP_009852411,100.0,8.21899E-114 SIF-HHPRED:  SIF-Syn: 

CDS 40266 - 40364
  /gene="58"
  /product="gp58"
  /function="membrane protein"
  /locus tag="Lila22_58"
    /note=Genemark calls start at 40266
    /note=SSC: 40266-40364 CP: no SCS: genemark ST: NA BLAST-Start:  GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.137, -4.6836130299641985, yes F: membrane protein SIF-BLAST:  SIF-HHPRED:  SIF-Syn: 
    /note=No hits in PhagesDB and NCBI BLAST
    /note=
    /note=No starterator
    /note=
    /note=Might not be a protein

CDS 40361 - 40483
  /gene="59"
  /product="gp59"
  /function="Hypothetical Protein"
  /locus tag="Lila22_59"
    /note=Original Glimmer call @bp 40361 has strength 13.12; Genemark calls start at 40361
    /note=SSC: 40361-40483 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein ZANY_56 [Gordonia phage Zany]],,NCBI, q1:s1 100.0% 1.78737E-17 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.188, -4.305994647947269, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein ZANY_56 [Gordonia phage Zany]],,UJQ86125,100.0,1.78737E-17 SIF-HHPRED:  SIF-Syn: 

CDS 40480 - 41073
  /gene="60"
  /product="gp60"
  /function="Hypothetical Protein"
  /locus tag="Lila22_60"
    /note=Original Glimmer call @bp 40480 has strength 11.46; Genemark calls start at 40480
    /note=SSC: 40480-41073 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp60 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.53359E-143 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.265, -4.413617268040186, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp60 [Gordonia phage Gibbin] ],,YP_009852413,100.0,1.53359E-143 SIF-HHPRED:  SIF-Syn: 

CDS 41073 - 41222
  /gene="61"
  /product="gp61"
  /function="Hypothetical Protein"
  /locus tag="Lila22_61"
    /note=Original Glimmer call @bp 41073 has strength 1.9
    /note=SSC: 41073-41222 CP: no SCS: glimmer ST: SS BLAST-Start: [hypothetical protein HWC71_gp60 [Gordonia phage Sadboi] ],,NCBI, q1:s1 100.0% 2.08878E-25 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.825, -2.881875840424956, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC71_gp60 [Gordonia phage Sadboi] ],,YP_009852711,100.0,2.08878E-25 SIF-HHPRED:  SIF-Syn: 

CDS 41200 - 43113
  /gene="62"
  /product="gp62"
  /function="DNA helicase"
  /locus tag="Lila22_62"
    /note=Original Glimmer call @bp 41200 has strength 15.15; Genemark calls start at 41197
    /note=SSC: 41200-43113 CP: yes SCS: both-gl ST: SS BLAST-Start: [DNA helicase [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 0.0 GAP: -23 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.88, -2.827683592113848, yes F: DNA helicase SIF-BLAST: ,,[DNA helicase [Gordonia phage OtterstedtS21]],,UVT31222,99.3721,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 43110 - 43277
  /gene="63"
  /product="gp63"
  /function="Hypothetical Protein"
  /locus tag="Lila22_63"
    /note=Original Glimmer call @bp 43110 has strength 10.06; Genemark calls start at 43110
    /note=SSC: 43110-43277 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_60 [Gordonia phage ParvusTarda] ],,NCBI, q1:s1 100.0% 9.00327E-33 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.123, -2.394485424036831, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_60 [Gordonia phage ParvusTarda] ],,UVT31041,100.0,9.00327E-33 SIF-HHPRED:  SIF-Syn: 

CDS 43270 - 43530
  /gene="64"
  /product="gp64"
  /function="Hypothetical Protein"
  /locus tag="Lila22_64"
    /note=Original Glimmer call @bp 43270 has strength 8.73; Genemark calls start at 43270
    /note=SSC: 43270-43530 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_JALEBI_61 [Gordonia phage Jalebi] ],,NCBI, q1:s1 100.0% 7.41584E-57 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.123, -2.3158002311349737, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_JALEBI_61 [Gordonia phage Jalebi] ],,UJQ86754,100.0,7.41584E-57 SIF-HHPRED:  SIF-Syn: 

CDS 43964 - 44299
  /gene="65"
  /product="gp65"
  /function="Hypothetical Protein"
  /locus tag="Lila22_65"
    /note=Original Glimmer call @bp 43964 has strength 16.16; Genemark calls start at 43820
    /note=SSC: 43964-44299 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein HWC71_gp65 [Gordonia phage Sadboi] ],,NCBI, q1:s49 100.0% 1.37087E-64 GAP: 433 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.268, -6.166667396375102, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC71_gp65 [Gordonia phage Sadboi] ],,YP_009852716,69.8113,1.37087E-64 SIF-HHPRED:  SIF-Syn: 

CDS complement (43747 - 43974)
  /gene="66"
  /product="gp66"
  /locus tag="Lila22_66"
    /note=Original Glimmer call @bp 43974 has strength 8.75
    /note=SSC: 43974-43747 CP: no SCS: glimmer ST: NA BLAST-Start:  GAP: 467 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.651, -6.009847715707425, no F:  SIF-BLAST:  SIF-HHPRED:  SIF-Syn: 

CDS 44442 - 45659
  /gene="67"
  /product="gp67"
  /function="Cas4 exonuclease"
  /locus tag="Lila22_67"
    /note=Original Glimmer call @bp 44442 has strength 14.01; Genemark calls start at 44442
    /note=SSC: 44442-45659 CP: yes SCS: both ST: SS BLAST-Start: [Cas4 family exonuclease [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 0.0 GAP: 467 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.712, -3.1832926594765674, no F: Cas4 exonuclease SIF-BLAST: ,,[Cas4 family exonuclease [Gordonia phage OtterstedtS21]],,UVT31226,99.5062,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 45661 - 45855
  /gene="68"
  /product="gp68"
  /function="Hypothetical Protein"
  /locus tag="Lila22_68"
    /note=Original Glimmer call @bp 45661 has strength 7.85; Genemark calls start at 45661
    /note=SSC: 45661-45855 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp64 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 5.2292E-37 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.781, -3.326590488964225, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp64 [Gordonia phage Lambo] ],,YP_009852617,100.0,5.2292E-37 SIF-HHPRED:  SIF-Syn: 

CDS 45848 - 46939
  /gene="69"
  /product="gp69"
  /function="RecA-like DNA recombinase"
  /locus tag="Lila22_69"
    /note=Original Glimmer call @bp 45848 has strength 15.4; Genemark calls start at 45848
    /note=SSC: 45848-46939 CP: no SCS: both ST: NI BLAST-Start: [Sak4-like ssDNA annealing protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.033, -2.5052746077145835, yes F: RecA-like DNA recombinase SIF-BLAST: ,,[Sak4-like ssDNA annealing protein [Gordonia phage Gibbin] ],,YP_009852422,100.0,0.0 SIF-HHPRED: RecA protein; Recombination, Radioresistance, DNA-repair, ATPase, DNA-binding protein, DNA BINDING PROTEIN; HET: AGS; 2.5A {Deinococcus radiodurans} SCOP: c.37.1.11, d.48.1.1,,,1XP8_A,49.3113,99.5 SIF-Syn: 

CDS 47116 - 47766
  /gene="70"
  /product="gp70"
  /function="Hypothetical Protein"
  /locus tag="Lila22_70"
    /note=Original Glimmer call @bp 47116 has strength 19.73; Genemark calls start at 47116
    /note=SSC: 47116-47766 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp70 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 1.61143E-153 GAP: 176 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.131, -4.34663776219455, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp70 [Gordonia phage Gibbin] ],,YP_009852423,100.0,1.61143E-153 SIF-HHPRED:  SIF-Syn: 

CDS 47958 - 48752
  /gene="71"
  /product="gp71"
  /function="oxidoreductase"
  /locus tag="Lila22_71"
    /note=Original Glimmer call @bp 47958 has strength 13.03; Genemark calls start at 48003
    /note=SSC: 47958-48752 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein HWC71_gp70 [Gordonia phage Sadboi] ],,NCBI, q1:s5 100.0% 0.0 GAP: 191 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.626, -5.553158935637373, no F: oxidoreductase SIF-BLAST: ,,[hypothetical protein HWC71_gp70 [Gordonia phage Sadboi] ],,YP_009852721,98.5075,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 48745 - 49443
  /gene="72"
  /product="gp72"
  /function="nucleotide pyrophosphohydrolase"
  /locus tag="Lila22_72"
    /note=Original Glimmer call @bp 48745 has strength 6.27; Genemark calls start at 48742
    /note=SSC: 48745-49443 CP: no SCS: both-gl ST: SS BLAST-Start: [hydrolase [Gordonia phage Sadboi] ],,NCBI, q1:s1 100.0% 3.5535E-169 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.618, -4.226420930929867, yes F: nucleotide pyrophosphohydrolase SIF-BLAST: ,,[hydrolase [Gordonia phage Sadboi] ],,YP_009852722,99.569,3.5535E-169 SIF-HHPRED:  SIF-Syn: 

CDS 49404 - 49631
  /gene="73"
  /product="gp73"
  /function="Hypothetical Protein"
  /locus tag="Lila22_73"
    /note=Original Glimmer call @bp 49404 has strength 5.68; Genemark calls start at 49419
    /note=SSC: 49404-49631 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_70 [Gordonia phage ParvusTarda] ],,NCBI, q6:s1 93.3333% 1.17433E-43 GAP: -40 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.066, -4.623211750916669, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_70 [Gordonia phage ParvusTarda] ],,UVT31051,100.0,1.17433E-43 SIF-HHPRED:  SIF-Syn: 

CDS 49624 - 50064
  /gene="74"
  /product="gp74"
  /function="Hypothetical Protein"
  /locus tag="Lila22_74"
    /note=Original Glimmer call @bp 49624 has strength 10.69; Genemark calls start at 49624
    /note=SSC: 49624-50064 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_OTTERSTEDTS21_72 [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 2.09368E-104 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.169, -2.2186743274732437, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_OTTERSTEDTS21_72 [Gordonia phage OtterstedtS21]],,UVT31233,100.0,2.09368E-104 SIF-HHPRED:  SIF-Syn: 

CDS 50066 - 50794
  /gene="75"
  /product="gp75"
  /function="methyltransferase"
  /locus tag="Lila22_75"
    /note=Original Glimmer call @bp 50066 has strength 10.67; Genemark calls start at 50066
    /note=SSC: 50066-50794 CP: yes SCS: both ST: SS BLAST-Start: [methyltransferase [Gordonia phage Zany] ],,NCBI, q1:s1 100.0% 0.0 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.54, -5.654416220050276, no F: methyltransferase SIF-BLAST: ,,[methyltransferase [Gordonia phage Zany] ],,UJQ86140,99.5868,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 50818 - 51261
  /gene="76"
  /product="gp76"
  /function="Hypothetical Protein"
  /locus tag="Lila22_76"
    /note=Original Glimmer call @bp 50818 has strength 11.23; Genemark calls start at 50794
    /note=SSC: 50818-51261 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_73 [Gordonia phage ParvusTarda]],,NCBI, q1:s9 100.0% 3.15029E-103 GAP: 23 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.583, -5.581282193137254, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_73 [Gordonia phage ParvusTarda]],,UVT31054,94.8387,3.15029E-103 SIF-HHPRED:  SIF-Syn: 

CDS 51261 - 51953
  /gene="77"
  /product="gp77"
  /function="oxidoreductase"
  /locus tag="Lila22_77"
    /note=Original Glimmer call @bp 51261 has strength 8.2; Genemark calls start at 51261
    /note=SSC: 51261-51953 CP: yes SCS: both ST: SS BLAST-Start: [FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 1.59888E-167 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.683, -3.3226484487933954, no F: oxidoreductase SIF-BLAST: ,,[FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase [Gordonia phage Lambo] ],,YP_009852626,100.0,1.59888E-167 SIF-HHPRED: Alcohol Dehydrogenase; Oxidroreductase, Dehydrogenase, Ketoreductase, SDR, NAD, OXIDOREDUCTASE; HET: NAD; 1.83A {Arthrobacter},,,6QHE_D,99.5652,99.9 SIF-Syn: 

CDS 52180 - 52329
  /gene="78"
  /product="gp78"
  /function="Hypothetical Protein"
  /locus tag="Lila22_78"
    /note=Original Glimmer call @bp 52180 has strength 15.69; Genemark calls start at 52219
    /note=SSC: 52180-52329 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_75 [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 1.70514E-26 GAP: 226 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.265, -4.203506921695074, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_75 [Gordonia phage ParvusTarda]],,UVT31056,100.0,1.70514E-26 SIF-HHPRED:  SIF-Syn: 

CDS 52326 - 52415
  /gene="79"
  /product="gp79"
  /function="membrane protein"
  /locus tag="Lila22_79"
    /note=Genemark calls start at 52326
    /note=SSC: 52326-52415 CP: yes SCS: genemark ST: SS BLAST-Start: [membrane protein [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 4.51807E-11 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.88, -3.6727816321281046, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Gordonia phage Gibbin] ],,YP_009852433,100.0,4.51807E-11 SIF-HHPRED:  SIF-Syn: 

CDS 52415 - 55756
  /gene="80"
  /product="gp80"
  /function="DnaE-like DNA polymerase III (alpha)"
  /locus tag="Lila22_80"
    /note=Original Glimmer call @bp 52511 has strength 8.56; Genemark calls start at 52415
    /note=SSC: 52415-55756 CP: yes SCS: both-gm ST: NI BLAST-Start: [DnaE-like DNA polymerase III alpha [Gordonia phage Jalebi] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.696, -4.256270330566151, no F: DnaE-like DNA polymerase III (alpha) SIF-BLAST: ,,[DnaE-like DNA polymerase III alpha [Gordonia phage Jalebi] ],,UJQ86770,99.9102,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 55753 - 56385
  /gene="81"
  /product="gp81"
  /function="MazG-like nucleotide pyrophosphohydrolase"
  /locus tag="Lila22_81"
    /note=Original Glimmer call @bp 55753 has strength 13.0; Genemark calls start at 55753
    /note=SSC: 55753-56385 CP: yes SCS: both ST: NI BLAST-Start: [MazG-like nucleotide pyrophosphohydrolase [Gordonia phage ParvusTarda] ],,NCBI, q1:s1 100.0% 2.10591E-150 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.131, -4.99877661786583, no F: MazG-like nucleotide pyrophosphohydrolase SIF-BLAST: ,,[MazG-like nucleotide pyrophosphohydrolase [Gordonia phage ParvusTarda] ],,UVT31059,99.5238,2.10591E-150 SIF-HHPRED: MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE; HYDROLASE, DIMERIC DUTPASE; HET: GOL, SO4; 1.7A {DEINOCOCCUS RADIODURANS},,,2YF4_C,71.9048,99.9 SIF-Syn: 

CDS 56385 - 56690
  /gene="82"
  /product="gp82"
  /function="Hypothetical Protein"
  /locus tag="Lila22_82"
    /note=Original Glimmer call @bp 56385 has strength 15.49; Genemark calls start at 56385
    /note=SSC: 56385-56690 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp79 [Gordonia phage Lambo] ],,NCBI, q1:s1 96.0396% 2.38001E-57 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.634, -3.4259484787582526, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp79 [Gordonia phage Lambo] ],,YP_009852632,96.9388,2.38001E-57 SIF-HHPRED:  SIF-Syn: 

CDS 56671 - 56931
  /gene="83"
  /product="gp83"
  /function="Hypothetical Protein"
  /locus tag="Lila22_83"
    /note=Original Glimmer call @bp 56671 has strength 9.78; Genemark calls start at 56671
    /note=SSC: 56671-56931 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein HWC68_gp84 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 3.80852E-53 GAP: -20 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.123, -2.3158002311349737, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp84 [Gordonia phage Gibbin] ],,YP_009852437,98.8372,3.80852E-53 SIF-HHPRED:  SIF-Syn: 

CDS 56928 - 58124
  /gene="84"
  /product="gp84"
  /function="ThyX-like thymidylate synthase"
  /locus tag="Lila22_84"
    /note=Original Glimmer call @bp 56928 has strength 12.5; Genemark calls start at 56928
    /note=SSC: 56928-58124 CP: yes SCS: both ST: SS BLAST-Start: [ThyX-like thymidylate synthase [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.033, -2.583959800616441, yes F: ThyX-like thymidylate synthase SIF-BLAST: ,,[ThyX-like thymidylate synthase [Gordonia phage ParvusTarda]],,UVT31063,99.4975,0.0 SIF-HHPRED: Thymidylate synthase thyX; Thymidylate synthase ThyX, Helicobacter pylori, TRANSFERASE; HET: UMP, FAD; 2.307A {Helicobacter pylori},,,3N3Y_D,60.0503,100.0 SIF-Syn: 

CDS 58124 - 58276
  /gene="85"
  /product="gp85"
  /function="Hypothetical Protein"
  /locus tag="Lila22_85"
    /note=Original Glimmer call @bp 58124 has strength 8.3; Genemark calls start at 58124
    /note=SSC: 58124-58276 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp086 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 4.38907E-26 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.029, -4.702334767722353, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp086 [Gordonia phage Ranch] ],,YP_009852538,100.0,4.38907E-26 SIF-HHPRED:  SIF-Syn: 

CDS 58254 - 58508
  /gene="86"
  /product="gp86"
  /function="Hypothetical Protein"
  /locus tag="Lila22_86"
    /note=Original Glimmer call @bp 58254 has strength 6.88; Genemark calls start at 58269
    /note=SSC: 58254-58508 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_JALEBI_84 [Gordonia phage Jalebi] ],,NCBI, q1:s1 100.0% 5.0239E-52 GAP: -23 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.614, -3.3275678682521845, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_JALEBI_84 [Gordonia phage Jalebi] ],,UJQ86776,100.0,5.0239E-52 SIF-HHPRED:  SIF-Syn: 
    /note=Re-run HHPRED, no evidence gathered
    /note=Host-Trained Gene mark did not load, someone else double check.

CDS 58477 - 59151
  /gene="87"
  /product="gp87"
  /function="RuvC-like resolvase"
  /locus tag="Lila22_87"
    /note=Original Glimmer call @bp 58477 has strength 8.25; Genemark calls start at 58516
    /note=SSC: 58477-59151 CP: no SCS: both-gl ST: SS BLAST-Start: [RuvC-like resolvase [Gordonia phage OtterstedtS21]],,NCBI, q1:s1 100.0% 6.29484E-166 GAP: -32 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.033, -2.5052746077145835, yes F: RuvC-like resolvase SIF-BLAST: ,,[RuvC-like resolvase [Gordonia phage OtterstedtS21]],,UVT31247,99.5536,6.29484E-166 SIF-HHPRED: c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId: 562]} | CLASS: Alpha and beta proteins (a/b), FOLD: Ribonuclease H-like motif, SUPFAM: Ribonuclease H-like, FAM: RuvC resolvase,,,SCOP_d1hjra_,75.4464,99.8 SIF-Syn: 

CDS 59162 - 59992
  /gene="88"
  /product="gp88"
  /function="lysin B"
  /locus tag="Lila22_88"
    /note=Original Glimmer call @bp 59162 has strength 8.42; Genemark calls start at 59144
    /note=SSC: 59162-59992 CP: no SCS: both-gl ST: SS BLAST-Start: [lysin B [Gordonia phage GretelLyn]],,NCBI, q1:s8 100.0% 0.0 GAP: 10 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.66, -4.535139944470626, no F: lysin B SIF-BLAST: ,,[lysin B [Gordonia phage GretelLyn]],,QFG08222,96.1131,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 60159 - 60407
  /gene="89"
  /product="gp89"
  /function="Hypothetical Protein"
  /locus tag="Lila22_89"
    /note=Original Glimmer call @bp 60159 has strength 9.71; Genemark calls start at 60159
    /note=SSC: 60159-60407 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC69_gp091 [Gordonia phage Ranch] ],,NCBI, q1:s1 100.0% 5.11144E-53 GAP: 166 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.368, -3.9881460756569185, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC69_gp091 [Gordonia phage Ranch] ],,YP_009852543,100.0,5.11144E-53 SIF-HHPRED:  SIF-Syn: 

CDS 60501 - 63272
  /gene="90"
  /product="gp90"
  /function="DNA primase/polymerase"
  /locus tag="Lila22_90"
    /note=Original Glimmer call @bp 60501 has strength 12.73; Genemark calls start at 60501
    /note=SSC: 60501-63272 CP: yes SCS: both ST: SS BLAST-Start: [DNA primase/polymerase [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 0.0 GAP: 93 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.046, -5.433606437787662, no F: DNA primase/polymerase SIF-BLAST: ,,[DNA primase/polymerase [Gordonia phage ParvusTarda]],,UVT31069,100.0,0.0 SIF-HHPRED: DNA primase; Helicase, DNA binding, AMPPNP, REPLICATION; HET: ANP; 3.1A {Staphylococcus aureus},,,7OM0_F,40.195,100.0 SIF-Syn: 

CDS 63747 - 63923
  /gene="91"
  /product="gp91"
  /function="Hypothetical Protein"
  /locus tag="Lila22_91"
    /note=Original Glimmer call @bp 63747 has strength 11.49; Genemark calls start at 63762
    /note=SSC: 63747-63923 CP: no SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_89 [Gordonia phage ParvusTarda]],,NCBI, q1:s39 100.0% 3.18736E-33 GAP: 474 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.711, -6.837625708603085, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_89 [Gordonia phage ParvusTarda]],,UVT31070,59.375,3.18736E-33 SIF-HHPRED:  SIF-Syn: 

CDS 64001 - 64612
  /gene="92"
  /product="gp92"
  /function="Hypothetical Protein"
  /locus tag="Lila22_92"
    /note=Original Glimmer call @bp 64001 has strength 7.39; Genemark calls start at 64082
    /note=SSC: 64001-64612 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_90 [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 5.02399E-142 GAP: 77 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.958, -2.6013996449736907, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_90 [Gordonia phage ParvusTarda]],,UVT31071,98.5222,5.02399E-142 SIF-HHPRED:  SIF-Syn: 

CDS 64603 - 64803
  /gene="93"
  /product="gp93"
  /function="Hypothetical Protein"
  /locus tag="Lila22_93"
    /note=Original Glimmer call @bp 64603 has strength 4.76; Genemark calls start at 64603
    /note=SSC: 64603-64803 CP: no SCS: both ST: SS BLAST-Start: [hypothetical protein HWC70_gp91 [Gordonia phage Lambo] ],,NCBI, q1:s1 100.0% 5.71386E-41 GAP: -10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.077, -4.811774952186101, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC70_gp91 [Gordonia phage Lambo] ],,YP_009852644,100.0,5.71386E-41 SIF-HHPRED:  SIF-Syn: 
    /note=Not All GM Coding Capacity for Suggested Start: Gene Candidate II (Starts at bp 64702) may be another potential start.

CDS 64796 - 65098
  /gene="94"
  /product="gp94"
  /function="Hypothetical Protein"
  /locus tag="Lila22_94"
    /note=Original Glimmer call @bp 64796 has strength 7.03; Genemark calls start at 64796
    /note=SSC: 64796-65098 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein SEA_PARVUSTARDA_92 [Gordonia phage ParvusTarda]],,NCBI, q1:s1 100.0% 2.3534E-64 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.012, -4.948253818225389, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_PARVUSTARDA_92 [Gordonia phage ParvusTarda]],,UVT31073,98.0198,2.3534E-64 SIF-HHPRED:  SIF-Syn: 

CDS 65113 - 65625
  /gene="95"
  /product="gp95"
  /function="Hypothetical Protein"
  /locus tag="Lila22_95"
    /note=Original Glimmer call @bp 65113 has strength 11.16; Genemark calls start at 65095
    /note=SSC: 65113-65625 CP: yes SCS: both-gl ST: SS BLAST-Start: [hypothetical protein SEA_OTTERSTEDTS21_95 [Gordonia phage OtterstedtS21]],,NCBI, q4:s3 97.6471% 1.45898E-102 GAP: 14 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.614, -4.155797982979146, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_OTTERSTEDTS21_95 [Gordonia phage OtterstedtS21]],,UVT31256,94.0828,1.45898E-102 SIF-HHPRED:  SIF-Syn: 

CDS 65625 - 66971
  /gene="96"
  /product="gp96"
  /function="Hypothetical Protein"
  /locus tag="Lila22_96"
    /note=Original Glimmer call @bp 65625 has strength 12.13; Genemark calls start at 65625
    /note=SSC: 65625-66971 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC71_gp95 [Gordonia phage Sadboi] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.032, -4.6353190821692705, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC71_gp95 [Gordonia phage Sadboi] ],,YP_009852746,100.0,0.0 SIF-HHPRED:  SIF-Syn: 

CDS 66955 - 67164
  /gene="97"
  /product="gp97"
  /function="Hypothetical Protein"
  /locus tag="Lila22_97"
    /note=Original Glimmer call @bp 66955 has strength 1.59
    /note=SSC: 66955-67164 CP: yes SCS: glimmer ST: SS BLAST-Start: [hypothetical protein HWC71_gp96 [Gordonia phage Sadboi] ],,NCBI, q1:s1 100.0% 8.18685E-42 GAP: -17 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.937, -2.7863799983944713, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC71_gp96 [Gordonia phage Sadboi] ],,YP_009852747,95.6522,8.18685E-42 SIF-HHPRED:  SIF-Syn: 

CDS 67175 - 67423
  /gene="98"
  /product="gp98"
  /function="Hypothetical Protein"
  /locus tag="Lila22_98"
    /note=Original Glimmer call @bp 67175 has strength 10.71; Genemark calls start at 67175
    /note=SSC: 67175-67423 CP: yes SCS: both ST: SS BLAST-Start: [hypothetical protein HWC68_gp99 [Gordonia phage Gibbin] ],,NCBI, q1:s1 100.0% 4.76898E-51 GAP: 10 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.276, -1.9310779259753799, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HWC68_gp99 [Gordonia phage Gibbin] ],,YP_009852452,100.0,4.76898E-51 SIF-HHPRED:  SIF-Syn: