CDS 1 - 528
  /gene="1"
  /product="gp1"
  /function="Hypothetical Protein"
  /locus tag="WestPM_1"
    /note=Original Glimmer call @bp 1 has strength 10.58; Genemark calls start at 1
    /note=SSC: 1-528 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_TINYMAN4_1 [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 2.87415E-118 GAP: 0 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.118, -6.722202626091887, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_TINYMAN4_1 [Microbacterium phage Tinyman4]],,WNN95202,100.0,2.87415E-118 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 525 - 1949
  /gene="2"
  /product="gp2"
  /function="terminase"
  /locus tag="WestPM_2"
    /note=Original Glimmer call @bp 525 has strength 11.86; Genemark calls start at 525
    /note=SSC: 525-1949 CP: no SCS: both ST: NI BLAST-Start: [terminase [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.151, -4.976282541825633, no F: terminase SIF-BLAST: ,,[terminase [Microbacterium phage Schimmels22]],,WNN96033,100.0,0.0 SIF-HHPRED: Terminase, large subunit; phage defense, pattern-recognition receptor, nlr, stand, atpase, ANTIVIRAL PROTEIN; HET: ATP;{Salmonella enterica},,,8DGC_F,96.8354,100.0 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 1952 - 3373
  /gene="3"
  /product="gp3"
  /function="portal protein"
  /locus tag="WestPM_3"
    /note=Original Glimmer call @bp 1952 has strength 20.86; Genemark calls start at 1952
    /note=SSC: 1952-3373 CP: no SCS: both ST: NI BLAST-Start: [portal protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.131, -4.331668843916977, no F: portal protein SIF-BLAST: ,,[portal protein [Microbacterium phage Schimmels22]],,WNN96034,99.7886,0.0 SIF-HHPRED: Portal protein; Bacteriophage, SPP1, Portal Protein, Head completion proteins, Connector Complex, DNA Channel, VIRAL PROTEIN; 2.7A {Bacillus subtilis},,,7Z4W_J,87.7378,99.9 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 3373 - 3582
  /gene="4"
  /product="gp4"
  /function="Hypothetical Protein"
  /locus tag="WestPM_4"
    /note=Original Glimmer call @bp 3373 has strength 4.64; Genemark calls start at 3373
    /note=SSC: 3373-3582 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_4 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 3.57499E-43 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.675, -3.925090669525967, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_4 [Microbacterium phage Schimmels22]],,WNN96035,97.1014,3.57499E-43 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 3579 - 3854
  /gene="5"
  /product="gp5"
  /function="Hypothetical Protein"
  /locus tag="WestPM_5"
    /note=Original Glimmer call @bp 3579 has strength 19.32; Genemark calls start at 3579
    /note=SSC: 3579-3854 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_5 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 3.1596E-59 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.324, -3.914968956777623, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_5 [Microbacterium phage Schimmels22]],,WNN96036,100.0,3.1596E-59 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 3856 - 4713
  /gene="6"
  /product="gp6"
  /function="Hypothetical Protein"
  /locus tag="WestPM_6"
    /note=Original Glimmer call @bp 3856 has strength 15.71; Genemark calls start at 3856
    /note=SSC: 3856-4713 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_TINYMAN4_7 [Microbacterium phage Tinyman4]],,NCBI, q1:s1 99.2982% 0.0 GAP: 1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.324, -4.301170562178417, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_TINYMAN4_7 [Microbacterium phage Tinyman4]],,WNN95208,97.1831,0.0 SIF-HHPRED: Phage_min_cap2 ; Phage minor capsid protein 2,,,PF06152.15,34.386,99.4 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=Some models suggest it is a minor capsid protein, which is based on the predicted model (HHPHred)
    /note=
    /note=PF06152: Phage minor capsid protein 2 Family of related phage minor capsid proteins.
    /note=
    /note=Compare gene 6 with gene 11

CDS 4821 - 5372
  /gene="7"
  /product="gp7"
  /function="scaffolding protein"
  /locus tag="WestPM_7"
    /note=Original Glimmer call @bp 4821 has strength 16.89; Genemark calls start at 4821
    /note=SSC: 4821-5372 CP: no SCS: both ST: NI BLAST-Start: [scaffolding protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 8.748E-123 GAP: 107 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.02, -2.417348306996335, yes F: scaffolding protein SIF-BLAST: ,,[scaffolding protein [Microbacterium phage Schimmels22]],,WNN96039,98.9071,8.748E-123 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 5411 - 6406
  /gene="8"
  /product="gp8"
  /function="major capsid protein"
  /locus tag="WestPM_8"
    /note=Original Glimmer call @bp 5411 has strength 21.03; Genemark calls start at 5411
    /note=SSC: 5411-6406 CP: no SCS: both ST: NI BLAST-Start: [major capsid protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: 38 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.169, -2.0949393225970705, yes F: major capsid protein SIF-BLAST: ,,[major capsid protein [Microbacterium phage Schimmels22]],,WNN96040,99.6979,0.0 SIF-HHPRED: Capsid; Bacteriophage, Mycobacteriophage, HK97-fold, Capsid, VIRUS; 2.7A {Mycobacterium phage Muddy},,,8EDU_G,96.0725,100.0 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 6476 - 6904
  /gene="9"
  /product="gp9"
  /function="Hypothetical Protein"
  /locus tag="WestPM_9"
    /note=Original Glimmer call @bp 6476 has strength 9.48; Genemark calls start at 6476
    /note=SSC: 6476-6904 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_10 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 7.3541E-95 GAP: 69 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.18, -1.9310779259753799, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_10 [Microbacterium phage Schimmels22]],,WNN96041,100.0,7.3541E-95 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 6876 - 7286
  /gene="10"
  /product="gp10"
  /function="Hypothetical Protein"
  /locus tag="WestPM_10"
    /note=Original Glimmer call @bp 6876 has strength 16.01; Genemark calls start at 6882
    /note=SSC: 6876-7286 CP: no SCS: both-gl ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_11 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 2.65732E-90 GAP: -29 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.793, -3.1164791313608173, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_11 [Microbacterium phage Schimmels22]],,WNN96042,100.0,2.65732E-90 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 7283 - 7627
  /gene="11"
  /product="gp11"
  /function="minor capsid protein"
  /locus tag="WestPM_11"
    /note=Original Glimmer call @bp 7283 has strength 12.63; Genemark calls start at 7283
    /note=SSC: 7283-7627 CP: no SCS: both ST: NI BLAST-Start: [minor capsid protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 2.42534E-76 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.0, -6.0794836438488185, no F: minor capsid protein SIF-BLAST: ,,[minor capsid protein [Microbacterium phage Schimmels22]],,WNN96043,100.0,2.42534E-76 SIF-HHPRED: Minor_capsid_2 ; Minor capsid protein,,,PF11114.12,79.8246,99.6 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=PF11114: Minor capsid protein
    /note=Most of the members of this family are annotated as being minor capsid proteins. The genomes carrying the genes usually have three similar proteins adjacent to each other, hence this one being named as No.2.

CDS 7624 - 7980
  /gene="12"
  /product="gp12"
  /function="tail terminator"
  /locus tag="WestPM_12"
    /note=Original Glimmer call @bp 7633 has strength 13.32; Genemark calls start at 7624
    /note=SSC: 7624-7980 CP: no SCS: both-gm ST: NI BLAST-Start: [tail terminator [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 3.21764E-78 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.295, -4.88730419163867, yes F: tail terminator SIF-BLAST: ,,[tail terminator [Microbacterium phage Schimmels22]],,WNN96044,98.3051,3.21764E-78 SIF-HHPRED: Tail terminator protein Rcc01690; "neck", "portal", "capsid", "tail tube", VIRUS; 3.58A {Rhodobacter capsulatus},,,6TE9_F,58.4746,97.8 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 7980 - 8282
  /gene="13"
  /product="gp13"
  /function="Hypothetical Protein"
  /locus tag="WestPM_13"
    /note=Original Glimmer call @bp 7980 has strength 15.62; Genemark calls start at 7980
    /note=SSC: 7980-8282 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_14 [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 2.12729E-65 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.5052746077145835, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_14 [Microbacterium phage HerculesXL] ],,UVG33799,100.0,2.12729E-65 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 8287 - 8787
  /gene="14"
  /product="gp14"
  /function="major tail protein"
  /locus tag="WestPM_14"
    /note=Original Glimmer call @bp 8287 has strength 15.12; Genemark calls start at 8287
    /note=SSC: 8287-8787 CP: no SCS: both ST: NI BLAST-Start: [major tail protein [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 1.38295E-113 GAP: 4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.848, -2.996490344739583, no F: major tail protein SIF-BLAST: ,,[major tail protein [Microbacterium phage Tinyman4]],,WNN95216,100.0,1.38295E-113 SIF-HHPRED: Major tail protein; Marine bacteriophage, Cryo-EM, Siphophage, Baseplate, Megatron protein, Tail fibre protein, Distal tail protein, Hub protein, VIRAL; 4.5A {Dinoroseobacter phage vB_DshS-R4C},,,8GTC_B,70.4819,64.2 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=major tail protein or not? The HHPred hit does not seem significant, but this Pham family has lots of members annotated as major tail protein. The major tail protein is in rank 1, is there another major tail protein? The EA11 phage Schimmels22 has only 1, which is part of this Pham family.

CDS 8827 - 9399
  /gene="15"
  /product="gp15"
  /function="tail assembly chaperone"
  /locus tag="WestPM_15"
    /note=Original Glimmer call @bp 8827 has strength 13.56; Genemark calls start at 8827
    /note=SSC: 8827-9399 CP: no SCS: both ST: NI BLAST-Start: [tail assembly chaperone [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 4.27687E-135 GAP: 39 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.583959800616441, yes F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Schimmels22]],,WNN96047,100.0,4.27687E-135 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=About tail assembly chaperone: gene 15 and gene 16: check programmed translational frameshift

CDS join(8827..9360,9360..9788)
  /gene="16"
  /product="gp16"
  /function="tail assembly chaperone"
  /locus tag="WestPM_16"
    /note=
    /note=SSC: 8827-9788 CP: no SCS: neither ST: NI BLAST-Start: [tail assembly chaperone [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: -573 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.583959800616441, yes F: tail assembly chaperone SIF-BLAST: ,,[tail assembly chaperone [Microbacterium phage Schimmels22]],,WNN96048,100.0,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 9807 - 12245
  /gene="17"
  /product="gp17"
  /function="tape measure protein"
  /locus tag="WestPM_17"
    /note=Original Glimmer call @bp 9807 has strength 20.81; Genemark calls start at 9807
    /note=SSC: 9807-12245 CP: no SCS: both ST: NI BLAST-Start: [tape measure protein [Microbacterium phage HerculesXL]],,NCBI, q1:s1 100.0% 0.0 GAP: 17 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.442961286954254, yes F: tape measure protein SIF-BLAST: ,,[tape measure protein [Microbacterium phage HerculesXL]],,UVG33803,99.5074,0.0 SIF-HHPRED: Tape Measure Protein, gp57; phage tail, tail tip, tape measure protein, VIRAL PROTEIN; 3.7A {Staphylococcus virus 80alpha},,,6V8I_CF,15.2709,99.9 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 12238 - 14487
  /gene="18"
  /product="gp18"
  /function="minor tail protein"
  /locus tag="WestPM_18"
    /note=Original Glimmer call @bp 12238 has strength 16.79; Genemark calls start at 12238
    /note=SSC: 12238-14487 CP: no SCS: both ST: NI BLAST-Start: [minor tail protein [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.706, -3.6047576016687017, yes F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Tinyman4]],,WNN95220,97.9973,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 14487 - 15656
  /gene="19"
  /product="gp19"
  /function="minor tail protein"
  /locus tag="WestPM_19"
    /note=Original Glimmer call @bp 14487 has strength 15.87; Genemark calls start at 14487
    /note=SSC: 14487-15656 CP: no SCS: both ST: NI BLAST-Start: [minor tail protein [Microbacterium phage HerculesXL]],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.406, -3.738562143838384, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage HerculesXL]],,UVG33805,97.6864,0.0 SIF-HHPRED: Prophage MuSo2, 43 kDa tail protein; MuSo2, Shewanella oneidensis MR-1, Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG; HET: MSE; 2.1A {Shewanella oneidensis} SCOP: b.106.1.1,,,3CDD_D,87.4036,99.9 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 15653 - 16420
  /gene="20"
  /product="gp20"
  /function="minor tail protein"
  /locus tag="WestPM_20"
    /note=Original Glimmer call @bp 15653 has strength 14.79; Genemark calls start at 15653
    /note=SSC: 15653-16420 CP: no SCS: both ST: NI BLAST-Start: [minor tail protein [Microbacterium phage Zepp] ],,NCBI, q1:s1 100.0% 2.82005E-177 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.869, -3.5088110057482766, no F: minor tail protein SIF-BLAST: ,,[minor tail protein [Microbacterium phage Zepp] ],,QIG58110,97.2549,2.82005E-177 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=Part of the structural genes that qualify for functional assignment via synteny only
    /note=minor tail protein or hypothetical protein

CDS 16437 - 16694
  /gene="21"
  /product="gp21"
  /function="Hypothetical Protein"
  /locus tag="WestPM_21"
    /note=Original Glimmer call @bp 16437 has strength 16.55; Genemark calls start at 16437
    /note=SSC: 16437-16694 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_22 [Microbacterium phage HerculesXL]],,NCBI, q1:s1 100.0% 2.31672E-52 GAP: 16 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.942, -2.583959800616441, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_22 [Microbacterium phage HerculesXL]],,UVG33807,100.0,2.31672E-52 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 16694 - 17560
  /gene="22"
  /product="gp22"
  /function="endolysin"
  /locus tag="WestPM_22"
    /note=Original Glimmer call @bp 16694 has strength 13.42; Genemark calls start at 16694
    /note=SSC: 16694-17560 CP: no SCS: both ST: NI BLAST-Start: [endolysin [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 0.0 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -3.095100142625534, yes F: endolysin SIF-BLAST: ,,[endolysin [Microbacterium phage HerculesXL] ],,UVG33808,97.9167,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 17628 - 18161
  /gene="23"
  /product="gp23"
  /function="membrane protein"
  /locus tag="WestPM_23"
    /note=Original Glimmer call @bp 17568 has strength 11.18; Genemark calls start at 17628
    /note=SSC: 17628-18161 CP: no SCS: both-gm ST: NI BLAST-Start: [membrane protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 8.08332E-115 GAP: 67 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.02, -2.2763497933341483, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Microbacterium phage Schimmels22]],,WNN96055,96.0452,8.08332E-115 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=DeepTMHMM predicted both the 17628-18161 version and the 17568-18161 version have 4 TM domains.
    /note=By synteny and final score, 17628-18161 seems to be more commonly annotated.

CDS 18161 - 18514
  /gene="24"
  /product="gp24"
  /function="membrane protein"
  /locus tag="WestPM_24"
    /note=Original Glimmer call @bp 18161 has strength 6.66; Genemark calls start at 18161
    /note=SSC: 18161-18514 CP: no SCS: both ST: NI BLAST-Start: [membrane protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 6.11586E-76 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.959, -4.702334767722353, no F: membrane protein SIF-BLAST: ,,[membrane protein [Microbacterium phage Schimmels22]],,WNN96056,99.1453,6.11586E-76 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=DeepTMHMM predicted 1 TM domain

CDS 18517 - 18843
  /gene="25"
  /product="gp25"
  /function="membrane protein"
  /locus tag="WestPM_25"
    /note=Original Glimmer call @bp 18517 has strength 16.83; Genemark calls start at 18517
    /note=SSC: 18517-18843 CP: no SCS: both ST: NI BLAST-Start: [membrane protein [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 9.00036E-65 GAP: 2 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.523003374675015, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Microbacterium phage HerculesXL] ],,UVG33811,100.0,9.00036E-65 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=DeepTMHMM predicted 3 TM domains

CDS complement (19014 - 19226)
  /gene="26"
  /product="gp26"
  /function="Hypothetical Protein"
  /locus tag="WestPM_26"
    /note=Original Glimmer call @bp 19226 has strength 15.45; Genemark calls start at 19226
    /note=SSC: 19226-19014 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_28 [Microbacterium phage HerculesXL]],,NCBI, q4:s1 87.1429% 3.73469E-28 GAP: 23 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.18, -1.993391246735709, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_28 [Microbacterium phage HerculesXL]],,UVG33813,90.3226,3.73469E-28 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (19250 - 19516)
  /gene="27"
  /product="gp27"
  /function="Hypothetical Protein"
  /locus tag="WestPM_27"
    /note=Original Glimmer call @bp 19516 has strength 26.19; Genemark calls start at 19516
    /note=SSC: 19516-19250 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein PBI_BANDIK_54 [Microbacterium phage Bandik] ],,NCBI, q1:s1 100.0% 4.07476E-41 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.442961286954254, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein PBI_BANDIK_54 [Microbacterium phage Bandik] ],,AVR56076,90.9091,4.07476E-41 SIF-HHPRED:  SIF-Syn: Unique among EA11 phages
    /note=This gene does not have homologs from other EA11 phages, except Ixel gene 53.

CDS complement (19513 - 19716)
  /gene="28"
  /product="gp28"
  /function="Hypothetical Protein"
  /locus tag="WestPM_28"
    /note=Genemark calls start at 19722
    /note=SSC: 19716-19513 CP: no SCS: genemark-cs ST: NI BLAST-Start: [hypothetical protein H3N88_gp32 [Microbacterium phage McGalleon] ],,NCBI, q1:s1 77.6119% 7.93762E-21 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.25, -4.075451192669358, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein H3N88_gp32 [Microbacterium phage McGalleon] ],,YP_009908608,88.4615,7.93762E-21 SIF-HHPRED:  SIF-Syn: Unique among EA11 phages
    /note=This gene product has no homologs from other EA11 phages, but has some similarities with EA1 phage gene products

CDS complement (19713 - 20570)
  /gene="29"
  /product="gp29"
  /function="Hypothetical Protein"
  /locus tag="WestPM_29"
    /note=Original Glimmer call @bp 20570 has strength 15.88; Genemark calls start at 20570
    /note=SSC: 20570-19713 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_31 [Microbacterium phage Schimmels22]],,NCBI, q1:s7 100.0% 0.0 GAP: 31 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.414, -6.385349498381551, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_31 [Microbacterium phage Schimmels22]],,WNN96062,95.189,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (20602 - 22224)
  /gene="30"
  /product="gp30"
  /function="DNA primase/helicase"
  /locus tag="WestPM_30"
    /note=Original Glimmer call @bp 22224 has strength 12.33; Genemark calls start at 22206
    /note=SSC: 22224-20602 CP: no SCS: both-gl ST: NI BLAST-Start: [DNA primase/helicase [Microbacterium phage HerculesXL]],,NCBI, q1:s18 100.0% 0.0 GAP: 26 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.786, -5.586198330050502, no F: DNA primase/helicase SIF-BLAST: ,,[DNA primase/helicase [Microbacterium phage HerculesXL]],,UVG33817,96.2298,0.0 SIF-HHPRED: c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} | CLASS: Alpha and beta proteins (a/b), FOLD: P-loop containing nucleoside triphosphate hydrolases, SUPFAM: P-loop containing nucleoside triphosphate hydrolases, FAM: RecA protein-like (ATPase-domain),,,SCOP_d1nlfa_,47.963,99.9 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (22251 - 22544)
  /gene="31"
  /product="gp31"
  /function="VRR-Nuc domain protein"
  /locus tag="WestPM_31"
    /note=Original Glimmer call @bp 22517 has strength 2.32; Genemark calls start at 22544
    /note=SSC: 22544-22251 CP: no SCS: both-gm ST: NI BLAST-Start: [VRR-Nuc domain protein [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 5.34446E-66 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.012, -6.600588204360394, no F: VRR-Nuc domain protein SIF-BLAST: ,,[VRR-Nuc domain protein [Microbacterium phage HerculesXL] ],,UVG33818,100.0,5.34446E-66 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (22544 - 23407)
  /gene="32"
  /product="gp32"
  /function="Hypothetical Protein"
  /locus tag="WestPM_32"
    /note=Original Glimmer call @bp 23407 has strength 24.77; Genemark calls start at 23407
    /note=SSC: 23407-22544 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_34 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: 31 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.65, -3.4224590770118644, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_34 [Microbacterium phage Schimmels22]],,WNN96065,98.6063,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (23439 - 24107)
  /gene="33"
  /product="gp33"
  /function="AAA-ATPase"
  /locus tag="WestPM_33"
    /note=Original Glimmer call @bp 24107 has strength 15.74; Genemark calls start at 24107
    /note=SSC: 24107-23439 CP: no SCS: both ST: NI BLAST-Start: [AAA-ATPase [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 1.23526E-155 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.073, -4.455662434380964, no F: AAA-ATPase SIF-BLAST: ,,[AAA-ATPase [Microbacterium phage HerculesXL] ],,UVG33820,98.6487,1.23526E-155 SIF-HHPRED: AAA_24 ; AAA domain,,,PF13479.10,87.3874,99.8 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (24104 - 25285)
  /gene="34"
  /product="gp34"
  /function="RecB-like exonuclease/helicase"
  /locus tag="WestPM_34"
    /note=Original Glimmer call @bp 25285 has strength 13.14; Genemark calls start at 25156
    /note=SSC: 25285-24104 CP: no SCS: both-gl ST: NI BLAST-Start: [Cas4 exonuclease [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 0.0 GAP: -14 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.037, -4.74447485678318, no F: RecB-like exonuclease/helicase SIF-BLAST: ,,[Cas4 exonuclease [Microbacterium phage Schimmels22]],,WNN96067,98.7277,0.0 SIF-HHPRED: ATP-dependent DNA helicase (UvrD/REP); DNA, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex; 3.5A {Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)},,,6PPU_A,82.9517,99.8 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (25272 - 27173)
  /gene="35"
  /product="gp35"
  /function="DNA polymerase I"
  /locus tag="WestPM_35"
    /note=Original Glimmer call @bp 27173 has strength 12.51; Genemark calls start at 27173
    /note=SSC: 27173-25272 CP: no SCS: both ST: NI BLAST-Start: [DNA polymerase I [Microbacterium phage HerculesXL]],,NCBI, q1:s1 100.0% 0.0 GAP: 224 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.068, -4.466674028236667, no F: DNA polymerase I SIF-BLAST: ,,[DNA polymerase I [Microbacterium phage HerculesXL]],,UVG33822,98.576,0.0 SIF-HHPRED: DNA polymerase nu; Pol Nu, Polymerase, error-prone DNA synthesis, TRANSFERASE-DNA complex; HET: MES; 2.95A {Homo sapiens},,,4XVK_A,98.8942,100.0 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (27398 - 27814)
  /gene="36"
  /product="gp36"
  /function="Hypothetical Protein"
  /locus tag="WestPM_36"
    /note=Original Glimmer call @bp 27814 has strength 18.5; Genemark calls start at 27814
    /note=SSC: 27814-27398 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_39 [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 1.83333E-46 GAP: 137 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.942, -2.442961286954254, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_39 [Microbacterium phage HerculesXL] ],,UVG33823,93.4783,1.83333E-46 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (27952 - 29337)
  /gene="37"
  /product="gp37"
  /function="DNA helicase"
  /locus tag="WestPM_37"
    /note=Original Glimmer call @bp 29337 has strength 9.87; Genemark calls start at 29337
    /note=SSC: 29337-27952 CP: no SCS: both ST: NI BLAST-Start: [DNA helicase [Microbacterium phage HerculesXL]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.523003374675015, yes F: DNA helicase SIF-BLAST: ,,[DNA helicase [Microbacterium phage HerculesXL]],,UVG33824,98.4816,0.0 SIF-HHPRED: Chromatin-remodeling ATPase INO80; Chromatin, Remodeller, Nucleosome, DNA Binding, Histones, DNA repair, ATPase, Helicase, Sliding, Complex, DNA BINDING PROTEIN; HET: ADP;{Homo sapiens},,,6HTS_G,98.2646,100.0 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (29334 - 29624)
  /gene="38"
  /product="gp38"
  /function="Hypothetical Protein"
  /locus tag="WestPM_38"
    /note=Original Glimmer call @bp 29624 has strength 5.75; Genemark calls start at 29624
    /note=SSC: 29624-29334 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_GARDENB_44 [Microbacterium phage GardenB]],,NCBI, q3:s2 95.8333% 2.30665E-26 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.517, -5.653132682171928, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_GARDENB_44 [Microbacterium phage GardenB]],,WIC89602,67.3913,2.30665E-26 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (29621 - 30694)
  /gene="39"
  /product="gp39"
  /function="MazG-like nucleotide pyrophosphohydrolase"
  /locus tag="WestPM_39"
    /note=Original Glimmer call @bp 30694 has strength 15.54; Genemark calls start at 30694
    /note=SSC: 30694-29621 CP: no SCS: both ST: NI BLAST-Start: [MazG-like nucleotide pyrophosphohydrolase [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 0.0 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.3, -3.966641956361594, no F: MazG-like nucleotide pyrophosphohydrolase SIF-BLAST: ,,[MazG-like nucleotide pyrophosphohydrolase [Microbacterium phage Tinyman4]],,WNN95241,97.479,0.0 SIF-HHPRED: NTP-PPase_YP_001813558; Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in Exiguobacterium sibiricum YP_001813558.,,,cd11545,35.014,99.9 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (30691 - 31386)
  /gene="40"
  /product="gp40"
  /function="Hypothetical Protein"
  /locus tag="WestPM_40"
    /note=Original Glimmer call @bp 31224 has strength 13.2; Genemark calls start at 31386
    /note=SSC: 31386-30691 CP: no SCS: both-gm ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_41 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 2.83676E-162 GAP: -23 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.006, -7.26512022081073, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_41 [Microbacterium phage Schimmels22]],,WNN96072,99.1379,2.83676E-162 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (31364 - 31954)
  /gene="41"
  /product="gp41"
  /function="thymidylate kinase"
  /locus tag="WestPM_41"
    /note=Original Glimmer call @bp 31954 has strength 15.98; Genemark calls start at 31954
    /note=SSC: 31954-31364 CP: no SCS: both ST: NI BLAST-Start: [thymidylate kinase [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 6.04538E-137 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.942, -2.583959800616441, yes F: thymidylate kinase SIF-BLAST: ,,[thymidylate kinase [Microbacterium phage Schimmels22]],,WNN96073,97.449,6.04538E-137 SIF-HHPRED: c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} | CLASS: Alpha and beta proteins (a/b), FOLD: P-loop containing nucleoside triphosphate hydrolases, SUPFAM: P-loop containing nucleoside triphosphate hydrolases, FAM: Nucleotide and nucleoside kinases,,,SCOP_d1nn5a_,51.0204,99.7 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (31954 - 32910)
  /gene="42"
  /product="gp42"
  /function="glycosyltransferase"
  /locus tag="WestPM_42"
    /note=Original Glimmer call @bp 32910 has strength 14.88; Genemark calls start at 32910
    /note=SSC: 32910-31954 CP: no SCS: both ST: NI BLAST-Start: [glycosyltransferase [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 0.0 GAP: -8 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.458, -3.5660483139923818, no F: glycosyltransferase SIF-BLAST: ,,[glycosyltransferase [Microbacterium phage HerculesXL] ],,UVG33828,98.7342,0.0 SIF-HHPRED: Putative glycosyltransferase protein; Glycosyltransferase, Protein Structure Initiative II, PSI-II, 12059a, NYSGXRC, Structural Genomics, New York SGX Research Center for; HET: MSE; 2.35A {Bacteroides fragilis},,,3BCV_A,32.0755,99.4 SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (32903 - 33142)
  /gene="43"
  /product="gp43"
  /function="Hypothetical Protein"
  /locus tag="WestPM_43"
    /note=Original Glimmer call @bp 33142 has strength 5.69; Genemark calls start at 33142
    /note=SSC: 33142-32903 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_45 [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 4.06203E-51 GAP: 65 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.03, -2.253486910374644, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_45 [Microbacterium phage HerculesXL] ],,UVG33829,100.0,4.06203E-51 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (33208 - 33354)
  /gene="44"
  /product="gp44"
  /function="membrane protein"
  /locus tag="WestPM_44"
    /note=Original Glimmer call @bp 33348 has strength 16.11; Genemark calls start at 33354
    /note=SSC: 33354-33208 CP: no SCS: both-gm ST: NI BLAST-Start: [membrane protein [Microbacterium phage Tinyman4] ],,NCBI, q1:s1 100.0% 1.46107E-20 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.869, -3.6514785093170086, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Microbacterium phage Tinyman4] ],,WNN95246,93.75,1.46107E-20 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=DeepTMHMM suggested this gene product is a membrane protein. starting position: 33348 or 33354

CDS complement (33351 - 34175)
  /gene="45"
  /product="gp45"
  /function="thymidylate synthase"
  /locus tag="WestPM_45"
    /note=Original Glimmer call @bp 34175 has strength 17.87; Genemark calls start at 34226
    /note=SSC: 34175-33351 CP: no SCS: both-gl ST: NI BLAST-Start: [thymidylate synthase [Microbacterium phage Schimmels22]],,NCBI, q1:s32 100.0% 0.0 GAP: 124 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.942, -2.442961286954254, yes F: thymidylate synthase SIF-BLAST: ,,[thymidylate synthase [Microbacterium phage Schimmels22]],,WNN96077,87.8689,0.0 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL
    /note=starting position: 34268, 34226, or 34175, see coding potential for choosing 34175, whereas when considering the length of the gap, 34268 might be a better fit, similar to the homolog in Schimmels22. Hard to decide.

CDS complement (34300 - 34611)
  /gene="46"
  /product="gp46"
  /function="Hypothetical Protein"
  /locus tag="WestPM_46"
    /note=Original Glimmer call @bp 34611 has strength 16.3; Genemark calls start at 34611
    /note=SSC: 34611-34300 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_TINYMAN4_47 [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 1.69635E-55 GAP: 28 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.942, -2.442961286954254, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_TINYMAN4_47 [Microbacterium phage Tinyman4]],,WNN95248,94.1748,1.69635E-55 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (34640 - 34867)
  /gene="47"
  /product="gp47"
  /function="Hypothetical Protein"
  /locus tag="WestPM_47"
    /note=Original Glimmer call @bp 34861 has strength 15.33; Genemark calls start at 34861
    /note=SSC: 34867-34640 CP: no SCS: both-cs ST: NI BLAST-Start: [hypothetical protein SEA_TINYMAN4_48 [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 2.57457E-44 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.869, -2.6814417326944517, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_TINYMAN4_48 [Microbacterium phage Tinyman4]],,WNN95249,100.0,2.57457E-44 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (34864 - 35040)
  /gene="48"
  /product="gp48"
  /function="Hypothetical Protein"
  /locus tag="WestPM_48"
    /note=Original Glimmer call @bp 35040 has strength 16.21; Genemark calls start at 35040
    /note=SSC: 35040-34864 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_50 [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 1.1161E-32 GAP: 11 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.888, -2.6217801767860207, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_50 [Microbacterium phage HerculesXL] ],,UVG33834,100.0,1.1161E-32 SIF-HHPRED:  SIF-Syn: 

CDS complement (35052 - 35240)
  /gene="49"
  /product="gp49"
  /function="Hypothetical Protein"
  /locus tag="WestPM_49"
    /note=Original Glimmer call @bp 35240 has strength 10.15; Genemark calls start at 35240
    /note=SSC: 35240-35052 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein HOT92_gp29 [Microbacterium phage Neferthena] ],,NCBI, q1:s1 100.0% 3.89441E-35 GAP: 31 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.619, -4.444803624783377, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein HOT92_gp29 [Microbacterium phage Neferthena] ],,YP_009808205,96.7742,3.89441E-35 SIF-HHPRED:  SIF-Syn: Unique among EA11 phages
    /note=This gene product does not have homologs from other EA11 phages

CDS complement (35272 - 35445)
  /gene="50"
  /product="gp50"
  /function="Hypothetical Protein"
  /locus tag="WestPM_50"
    /note=Genemark calls start at 35445
    /note=SSC: 35445-35272 CP: no SCS: genemark ST: NI BLAST-Start: [hypothetical protein SEA_KAUALA_49 [Microbacterium phage Kauala]],,NCBI, q1:s3 100.0% 7.05537E-12 GAP: -1 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.932, -5.720335836988938, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_KAUALA_49 [Microbacterium phage Kauala]],,QNL31061,66.6667,7.05537E-12 SIF-HHPRED:  SIF-Syn: Unique among EA11 phages
    /note=This gene product does not have homologs from other EA11 phages

CDS complement (35445 - 36179)
  /gene="51"
  /product="gp51"
  /function="Hypothetical Protein"
  /locus tag="WestPM_51"
    /note=Original Glimmer call @bp 36179 has strength 17.69; Genemark calls start at 36179
    /note=SSC: 36179-35445 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_51 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 7.25611E-172 GAP: 54 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 2.295, -3.8366550365551095, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_51 [Microbacterium phage Schimmels22]],,WNN96082,99.1803,7.25611E-172 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (36234 - 36620)
  /gene="52"
  /product="gp52"
  /function="Hypothetical Protein"
  /locus tag="WestPM_52"
    /note=Original Glimmer call @bp 36620 has strength 8.87; Genemark calls start at 36620
    /note=SSC: 36620-36234 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_53 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 98.4375% 6.02015E-84 GAP: -4 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.973, -4.881783680106921, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_53 [Microbacterium phage Schimmels22]],,WNN96084,98.4127,6.02015E-84 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (36617 - 37129)
  /gene="53"
  /product="gp53"
  /function="Hypothetical Protein"
  /locus tag="WestPM_53"
    /note=Original Glimmer call @bp 37129 has strength 11.31; Genemark calls start at 37129
    /note=SSC: 37129-36617 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_54 [Microbacterium phage HerculesXL]],,NCBI, q1:s1 70.5882% 2.39541E-75 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 3.02, -2.338663114094478, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_54 [Microbacterium phage HerculesXL]],,UVG33838,95.0413,2.39541E-75 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (37129 - 37599)
  /gene="54"
  /product="gp54"
  /function="Hypothetical Protein"
  /locus tag="WestPM_54"
    /note=Original Glimmer call @bp 37599 has strength 10.63; Genemark calls start at 37599
    /note=SSC: 37599-37129 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_55 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 2.10922E-99 GAP: -4 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 1.788, -5.008614874058139, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_55 [Microbacterium phage Schimmels22]],,WNN96086,94.8718,2.10922E-99 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (37596 - 37844)
  /gene="55"
  /product="gp55"
  /function="Hypothetical Protein"
  /locus tag="WestPM_55"
    /note=Original Glimmer call @bp 37844 has strength 12.98; Genemark calls start at 37844
    /note=SSC: 37844-37596 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_TINYMAN4_55 [Microbacterium phage Tinyman4]],,NCBI, q1:s1 100.0% 4.80185E-52 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.848, -3.9507328541789084, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_TINYMAN4_55 [Microbacterium phage Tinyman4]],,WNN95256,100.0,4.80185E-52 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS complement (37844 - 37978)
  /gene="56"
  /product="gp56"
  /function="Hypothetical Protein"
  /locus tag="WestPM_56"
    /note=Original Glimmer call @bp 37978 has strength 8.57; Genemark calls start at 37978
    /note=SSC: 37978-37844 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_57 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 4.7671E-21 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.448, -4.0338999058337315, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_57 [Microbacterium phage Schimmels22]],,WNN96088,95.4545,4.7671E-21 SIF-HHPRED:  SIF-Syn: consistent with Schimmels22

CDS complement (37978 - 38235)
  /gene="57"
  /product="gp57"
  /function="Hypothetical Protein"
  /locus tag="WestPM_57"
    /note=Original Glimmer call @bp 38235 has strength 14.97; Genemark calls start at 38235
    /note=SSC: 38235-37978 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_HERCULESXL_58 [Microbacterium phage HerculesXL] ],,NCBI, q1:s1 100.0% 9.00983E-53 GAP: 425 bp gap LO: yes RBS: Kibler 6, Karlin Medium, 3.03, -2.394485424036831, yes F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_HERCULESXL_58 [Microbacterium phage HerculesXL] ],,UVG33842,97.6471,9.00983E-53 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 38661 - 38858
  /gene="58"
  /product="gp58"
  /function="membrane protein"
  /locus tag="WestPM_58"
    /note=Original Glimmer call @bp 38661 has strength 11.41; Genemark calls start at 38661
    /note=SSC: 38661-38858 CP: no SCS: both ST: NI BLAST-Start: [membrane protein [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 6.87328E-38 GAP: 425 bp gap LO: no RBS: Kibler 6, Karlin Medium, 2.942, -2.794070146961553, yes F: membrane protein SIF-BLAST: ,,[membrane protein [Microbacterium phage Schimmels22]],,WNN96090,98.4615,6.87328E-38 SIF-HHPRED:  SIF-Syn: consistent with other EA11 phages, such as Tinyman4 and HerculesXL

CDS 38858 - 39406
  /gene="59"
  /product="gp59"
  /function="Hypothetical Protein"
  /locus tag="WestPM_59"
    /note=Original Glimmer call @bp 38858 has strength 12.41; Genemark calls start at 38858
    /note=SSC: 38858-39406 CP: no SCS: both ST: NI BLAST-Start: [hypothetical protein SEA_SCHIMMELS22_60 [Microbacterium phage Schimmels22]],,NCBI, q1:s1 100.0% 1.48178E-107 GAP: -1 bp gap LO: no RBS: Kibler 6, Karlin Medium, 1.607, -5.317780913136193, no F: Hypothetical Protein SIF-BLAST: ,,[hypothetical protein SEA_SCHIMMELS22_60 [Microbacterium phage Schimmels22]],,WNN96091,97.1098,1.48178E-107 SIF-HHPRED:  SIF-Syn: consistent with EA11 phage Schimmels22