Gordonia phage Adgers
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Detailed Information for Phage Adgers
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAriel McShane
Year Found2016
Location FoundCharleston, SC USA
Finding InstitutionCollege of Charleston
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates32.776097 N, 79.925374 W Map
Discovery NotesSoil was taken from the edge of the marsh-like border of the Charleston Harbor. The top layer of fallen reeds was pushed aside and the soil underneath was sampled.
Naming NotesThe name of this phage is the name of a small street near the sampling site that I saw as I was collecting the soil.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1135
Genome length (bp)76008
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length191 bp
GC Content59.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCS
SubclusterCS2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThis phage is suspected to be a temperate phage, as the plaques would clear at the edges and then have new bacterial growth in the center.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Adgers_1

Adgers_2

Adgers_3

Adgers_4

Adgers_5
(DNA binding protein)

Adgers_6

Adgers_7

Adgers_8

Adgers_9
(primase)

Adgers_10

Adgers_11
(terminase)

Adgers_12
(portal protein)

Adgers_13
(minor tail protein)

Adgers_14

Adgers_15
(capsid maturation protease)

Adgers_16
(scaffolding protein)

Adgers_17
(major capsid protein)

Adgers_18
(head-to-tail connector protein)

Adgers_19
(head-to-tail connector protein)

Adgers_20
(head-to-tail connector protein)

Adgers_21
(head-to-tail connector protein)

Adgers_22
(head-to-tail connector protein)

Adgers_23
(head-to-tail connector protein)

Adgers_24
(major tail protein)

Adgers_26
(tail assembly chaperone)

Adgers_27
(tail assembly chaperone)

Adgers_28
(tape measure protein)

Adgers_29
(minor tail protein)

Adgers_30
(minor tail protein)

Adgers_31
(minor tail protein)

Adgers_32
(membrane protein)

Adgers_33
(membrane protein)

Adgers_34
(membrane protein)

Adgers_35
(lysin A, N-acetyl-BetaD-muramidase domain)

Adgers_36
(lysin A, peptidase domain)

Adgers_37
(membrane protein)

Adgers_38
(membrane protein)

Adgers_39
(membrane protein)

Adgers_40

Adgers_41
(exonuclease/helicase)

Adgers_42

Adgers_43

Adgers_44

Adgers_45

Adgers_46

Adgers_47

Adgers_48
(DNA methylase)

Adgers_49

Adgers_50

Adgers_51
(lysin B)

Adgers_52
(nucleotide pyrophosphohydrolase)

Adgers_53

Adgers_54
(resolvase)

Adgers_55

Adgers_56

Adgers_57
(DNA polymerase III sliding clamp (beta))

Adgers_58

Adgers_59
(DNA polymerase III subunit)

Adgers_60
(HTH DNA binding protein)

Adgers_61

Adgers_62
(DNA helicase)

Adgers_63

Adgers_64
(zinc-finger DNA binding domain protein)

Adgers_65

Adgers_66
(HTH DNA binding protein)

Adgers_67

Adgers_68

Adgers_69

Adgers_70

Adgers_71

Adgers_72

Adgers_73

Adgers_74

Adgers_75

Adgers_76

Adgers_77

Adgers_78

Adgers_79

Adgers_80

Adgers_81

Adgers_82

Adgers_83

Adgers_84

Adgers_85
(HNH endonuclease)

Adgers_86

Adgers_87

Adgers_88

Adgers_89

Adgers_90

Adgers_91
(cobalamin biosynthesis protein)

Adgers_92
(AAA-ATPase)

Adgers_93

Adgers_94

Adgers_95

Adgers_96

Adgers_97

Adgers_98

Adgers_99

Adgers_100

Adgers_101

Adgers_102

Adgers_103

Adgers_104

Adgers_105

Adgers_106

Adgers_107

Adgers_108

Adgers_109

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG757152
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload