Gordonia phage Adora
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Detailed Information for Phage Adora
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAmanda Cremeans
Year Found2017
Location FoundBeaver Falls, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature17°C
GPS Coordinates40.786215 N, 80.330441 W Map
Discovery NotesCollection time: 10:55 am EST
Conditions: partly cloudy, but sunny blue sky, the previous day was warm and rainy.
Soil quality: very soft and moist from the rain, not clay-like or sandy, some organic material present.

Protocol:
Using a small, inside out, ziplock bag as a glove, I collected a handful of lose soil from the ground near a dumpster behind an auto shop near my home. I collected soil from the surface level to about an inch down in the ground. I wanted the freshest sample possible, so I collected the sample as I was leaving to go to the lab. The soil was stored at room temperature for about an hour and half before being prepared for the shaker.
Naming NotesMy grandmother's middle name is Adora and I have always loved this name. She turned 93 years old the same day that Adora was first isolated.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1075
Genome length (bp)51827
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTGCCAAGGGGA
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ4
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusAwaiting_QC
Plaque NotesAdora particles have a haloed morphology.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 56
Pitt Freezer Box Grid# G7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload