Mycobacterium phage ArcherS7
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Detailed Information for Phage ArcherS7
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesNoose
Found ByWilliam Blaine
Year Found2011
Location FoundHartford , CT USA
Finding InstitutionTrinity College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.744494 N, 72.690511 W Map
Discovery NotesArcherS7 was found in the soil surrounding a pink-flowered plan. The soil was extracted one inch under the surface. The soil was very moist, dark, and coarse.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 1, 2012
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage230
Genome length (bp)156558
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesAll plaques are relatively small, round, and very clear.
MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes237
Number of tRNAs31
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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ArcherS7_1

ArcherS7_2

ArcherS7_3
(nucleotidyltransferase)

ArcherS7_4

ArcherS7_5

ArcherS7_6

ArcherS7_7

ArcherS7_8

ArcherS7_9

ArcherS7_10

ArcherS7_11

ArcherS7_12

ArcherS7_13

ArcherS7_14

ArcherS7_15

ArcherS7_16

ArcherS7_17
(histidine triad domain protein)

ArcherS7_18

ArcherS7_19

ArcherS7_20

ArcherS7_21

ArcherS7_22

ArcherS7_23

ArcherS7_24
(HNH endonuclease domain)

ArcherS7_25

ArcherS7_26

ArcherS7_27

ArcherS7_28
(band-7 protein)

ArcherS7_29

ArcherS7_30

ArcherS7_31

ArcherS7_32

ArcherS7_33

ArcherS7_34

ArcherS7_35

ArcherS7_36

ArcherS7_37

ArcherS7_38

ArcherS7_39

ArcherS7_40

ArcherS7_41

ArcherS7_42

ArcherS7_43

ArcherS7_44

ArcherS7_45

ArcherS7_46

ArcherS7_47

ArcherS7_48

ArcherS7_49

ArcherS7_50

ArcherS7_51

ArcherS7_52

ArcherS7_53

ArcherS7_54

ArcherS7_55

ArcherS7_56

ArcherS7_57

ArcherS7_58

ArcherS7_59

ArcherS7_60

ArcherS7_61

ArcherS7_62
(HTH DNA binding domain)

ArcherS7_63

ArcherS7_64

ArcherS7_65

ArcherS7_66

ArcherS7_67

ArcherS7_68

ArcherS7_69

ArcherS7_70

ArcherS7_71

ArcherS7_72

ArcherS7_73

ArcherS7_74

ArcherS7_75

ArcherS7_76

ArcherS7_77

ArcherS7_78

ArcherS7_79

ArcherS7_80

ArcherS7_81

ArcherS7_82

ArcherS7_83
(ParB-like domain)

ArcherS7_87

ArcherS7_88

ArcherS7_89
(portal)

ArcherS7_90

ArcherS7_91

ArcherS7_92
(ThyX-like)

ArcherS7_93

ArcherS7_94

ArcherS7_95
(HNH homing endonuclease domain)

ArcherS7_96
(LysM-domain)

ArcherS7_97

ArcherS7_98

ArcherS7_99
(major capsid protein)

ArcherS7_100

ArcherS7_101

ArcherS7_102

ArcherS7_103

ArcherS7_104

ArcherS7_105

ArcherS7_106

ArcherS7_107

ArcherS7_108

ArcherS7_109

ArcherS7_110

ArcherS7_111

ArcherS7_112

ArcherS7_113

ArcherS7_114

ArcherS7_115

ArcherS7_116

ArcherS7_117

ArcherS7_118

ArcherS7_119

ArcherS7_120

ArcherS7_121

ArcherS7_122

ArcherS7_123

ArcherS7_124

ArcherS7_125

ArcherS7_126

ArcherS7_127

ArcherS7_128

ArcherS7_129
(tail assembly chaperone)

ArcherS7_130
(tail assembly chaperone)

ArcherS7_131
(tapemeasure)

ArcherS7_132

ArcherS7_133

ArcherS7_134

ArcherS7_135
(minor tail protein)

ArcherS7_136

ArcherS7_137
(minor tail protein)

ArcherS7_138
(lysozyme)

ArcherS7_139
(baseplate J)

ArcherS7_140
(HNH endonuclease domain)

ArcherS7_141

ArcherS7_142

ArcherS7_143
(minor tail subunit)

ArcherS7_144
(minor tail protein)

ArcherS7_145

ArcherS7_146

ArcherS7_147

ArcherS7_148

ArcherS7_149

ArcherS7_150

ArcherS7_151

ArcherS7_152

ArcherS7_153

ArcherS7_155

ArcherS7_158

ArcherS7_159
(peptidyl tRNA hydrolase domain)

ArcherS7_173
(Endo VII)

ArcherS7_175
(D-ala-D-ala carboxypeptidase)

ArcherS7_186

ArcherS7_187
(helicase)

ArcherS7_188

ArcherS7_189

ArcherS7_190

ArcherS7_191

ArcherS7_192

ArcherS7_193

ArcherS7_194

ArcherS7_195

ArcherS7_196

ArcherS7_197

ArcherS7_198
(aminotransferase)

ArcherS7_199

ArcherS7_200

ArcherS7_201

ArcherS7_202
(DnaC-like)

ArcherS7_203
(DnaB-like helicase)

ArcherS7_204

ArcherS7_205
(DNA primase)

ArcherS7_206

ArcherS7_207

ArcherS7_208
(DnaJ-like domain)

ArcherS7_209
(DNA pol III alpha subunit)

ArcherS7_210
(RF1)

ArcherS7_211
(RecA-like)

ArcherS7_212

ArcherS7_213

ArcherS7_214
(HNH endonuclease domain)

ArcherS7_215
(RusA-like)

ArcherS7_216

ArcherS7_217

ArcherS7_218

ArcherS7_219

ArcherS7_220

ArcherS7_221

ArcherS7_222

ArcherS7_223

ArcherS7_226

ArcherS7_227

ArcherS7_228

ArcherS7_229

ArcherS7_230

ArcherS7_231

ArcherS7_232

ArcherS7_233

ArcherS7_234
(Ro)

ArcherS7_235

ArcherS7_236

ArcherS7_237

ArcherS7_238

ArcherS7_239

ArcherS7_240

ArcherS7_241
(glycosyl transferase)

ArcherS7_242

ArcherS7_243
(glycosyl transferase)

ArcherS7_244
(galactosyl transferase)

ArcherS7_245

ArcherS7_246
(glycosyl transferase)

ArcherS7_247

ArcherS7_248

ArcherS7_249

ArcherS7_250

ArcherS7_251
(Lysin A)

ArcherS7_252
(holin)

ArcherS7_253
(Lysin B)

ArcherS7_254
(terminase)

ArcherS7_255

ArcherS7_256

ArcherS7_257

ArcherS7_258

ArcherS7_259
(polynucleotide kinase)

ArcherS7_260

ArcherS7_261

ArcherS7_262
(ser-thr kinase)

ArcherS7_263

ArcherS7_264

ArcherS7_265
(PurA)

ArcherS7_266

ArcherS7_267

ArcherS7_268

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKC748970
Refseq NumberNC_021348
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload