Propionibacterium phage Attacne

BLAST and GeneMark available upon entering GPS coordinates

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Detailed Information for Phage Attacne
Discovery Information
Isolation HostPropionibacterium acnes ATCC 6919
Found ByFiona Bhondoekhan
Year Found2013
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS CoordinatesUnavailable
Discovery NotesPhage isolation and genome annotation performed by Fiona Bhondoekhan, Joan Cheng, Anthony Hoang, Rohini Jain, and Rachelle Gonzales (UCLA). DNA preparation performed by Krisanavane Reddi (UCLA). Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 18, 2014
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage393
Genome length (bp)28876
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTCGTACGGCTT
GC Content54.7%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterBU
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque Notesclear, small, round plaques
MorphotypeSiphoviridae
Number of Genes45
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKR337651
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2013UCLAAttacneFB
SEA Lysate Titer 7.00x10^8 pfu/mL
Date of SEA Lysate Titering May 24, 2013
Pitt Freezer Box# 23
Pitt Freezer Box Grid# B11
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload