Gordonia phage BENtherdunthat
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage BENtherdunthat
Discovery Information
Isolation HostGordonia terrae 3612
Found ByBenjamin Martin
Year Found2016
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.442283 N, 79.954758 W Map
Discovery NotesHarvested from garden with naturally occurring soil. The temperature the day the sample was harvested was 85 degrees Fahrenheit, and the weather was sunny but partially cloudy. The phage was isolated through Direct Isolation technique.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1622
Genome length (bp)54867
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content63.4%
Sequencing NotesMixed population, 2% of reads blast to Cluster DL
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
Subcluster--
Other Cluster Members
Plaque NotesThe plaques are small and circular, and tend to form similar sizes. The plaques also tend to have a bluish-clear color to them. The diameter of the plaques is generally about 1mm.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

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(HNH endonuclease)

BENtherdunthat_2
(terminase, small subunit)

BENtherdunthat_3
(terminase, large subunit)

BENtherdunthat_4
(portal protein)

BENtherdunthat_5
(capsid assembly protease)

BENtherdunthat_6
(scaffolding protein)

BENtherdunthat_7
(major capsid protein)

BENtherdunthat_8

BENtherdunthat_9
(head to tail connector)

BENtherdunthat_10
(head to tail connector)

BENtherdunthat_11
(head to tail connector)

BENtherdunthat_12
(head to tail connector)

BENtherdunthat_13
(major tail protein)

BENtherdunthat_14

BENtherdunthat_15
(tail assembly chaperone)

BENtherdunthat_16
(tail assembly chaperone)

BENtherdunthat_17

BENtherdunthat_18
(tape measure protein)

BENtherdunthat_19
(minor tail protein)

BENtherdunthat_20
(minor tail protein)

BENtherdunthat_21
(minor tail protein)

BENtherdunthat_22
(lysin A, peptidase M15 domain)

BENtherdunthat_23
(lysin A, glycosyl hydrolase domain)

BENtherdunthat_24
(holin)

BENtherdunthat_25

BENtherdunthat_26

BENtherdunthat_27

BENtherdunthat_28
(lysin B)

BENtherdunthat_29

BENtherdunthat_30

BENtherdunthat_31

BENtherdunthat_32

BENtherdunthat_33

BENtherdunthat_34
(minor tail protein)

BENtherdunthat_35
(minor tail protein)

BENtherdunthat_36

BENtherdunthat_37

BENtherdunthat_38
(HTH DNA binding Protein)

BENtherdunthat_39

BENtherdunthat_40

BENtherdunthat_41

BENtherdunthat_42

BENtherdunthat_43
(HTH DNA binding domain protein)

BENtherdunthat_44

BENtherdunthat_45

BENtherdunthat_46

BENtherdunthat_47

BENtherdunthat_48

BENtherdunthat_49
(hydrolase)

BENtherdunthat_50
(integrase (Y-int))

BENtherdunthat_51
(HNH endonuclease)

BENtherdunthat_52
(HTH DNA binding protein)

BENtherdunthat_53
(Metallopeptidased domain)

BENtherdunthat_54
(immunity repressor)

BENtherdunthat_55
(Cro protein)

BENtherdunthat_56
(phage antirepressor-like protein)

BENtherdunthat_57

BENtherdunthat_58

BENtherdunthat_59

BENtherdunthat_60

BENtherdunthat_61

BENtherdunthat_62

BENtherdunthat_63

BENtherdunthat_64

BENtherdunthat_65
(MazG nucleotide pyrophosphohydrolase)

BENtherdunthat_66

BENtherdunthat_67

BENtherdunthat_68

BENtherdunthat_69

BENtherdunthat_70
(WhiB-like regulatory protein)

BENtherdunthat_71

BENtherdunthat_72

BENtherdunthat_73
(Exonuclease)

BENtherdunthat_74

BENtherdunthat_75

BENtherdunthat_76

BENtherdunthat_77

BENtherdunthat_78

BENtherdunthat_79

BENtherdunthat_80

BENtherdunthat_81

BENtherdunthat_82

BENtherdunthat_83

BENtherdunthat_84

BENtherdunthat_85

BENtherdunthat_86

BENtherdunthat_87
(ATPase)

BENtherdunthat_88

BENtherdunthat_89

BENtherdunthat_90
(RusA resolvase (endonuclease))

BENtherdunthat_91

BENtherdunthat_92

BENtherdunthat_93

BENtherdunthat_94

BENtherdunthat_95

BENtherdunthat_96

BENtherdunthat_97
(Helix-Turn-Helix DNA binding protein)

BENtherdunthat_98

BENtherdunthat_99

BENtherdunthat_100

BENtherdunthat_101

BENtherdunthat_102
(HNH endonuclease domain)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG099939
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload