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Mycobacterium phage BeanWater
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Detailed Information for Phage BeanWater
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageGayleyAve
Found ByTeam Pirates of the CUREibbean
Year Found2012
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
ProgramUnavailable
From enriched soil sample?Yes
Isolation Temperature35°C
GPS Coordinates34.075 N, 118.44 W Map
Discovery NotesDiscovered in spring 2012 by Team Pirates of the CURE-ibbean: Tiffany Chow, Josephine Nguyen, Sean Chang, and Khristina Ipapo.

BeanWater was isolated from an enrichment culture inoculated with a water sample from Stone Canyon Creek behind the UCLA Anderson School of Management. The sample was collected on April 4, 2012, by another student in the same class, Nick Morales.

DNA preparation was performed by Dr. Krisanavane Reddi (UCLA). The genome was assembled by William Villella (UCLA) and the assembly was curated by Dan Russel from the University of Pittsburgh.

Beanwater was annotated in Fall of 2013 by Teams: Fly Like a T4 (Amrit Dosanjh, Jaskirat Dhanoa, Jasmine Gajeton, Alex Tonthat), Tranducers ( Conny Tran, Stephanie Vu, Cheng Tian, Kyoko Yamaguchi), and Where the Wild Things Are. The genome was curated in Spring 2014 by Amrit Dosanjh and Jordan Meyer.
Naming NotesFormerly named CapNCrunch. GayleyAve is a duplicate of BeanWater and was unfortunately isolated as a contaminant.

Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 18, 2013
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage32
Genome length (bp)154061
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesClear plaques of 1-2 mm diameter.
MorphotypeMyoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

BeanWater_1

BeanWater_2

BeanWater_3

BeanWater_4

BeanWater_5

BeanWater_6

BeanWater_7

BeanWater_8

BeanWater_9

BeanWater_10

BeanWater_11

BeanWater_12

BeanWater_13

BeanWater_14

BeanWater_15

BeanWater_16

BeanWater_17

BeanWater_18

BeanWater_19

BeanWater_20

BeanWater_21

BeanWater_22

BeanWater_23

BeanWater_24

BeanWater_25

BeanWater_26

BeanWater_27

BeanWater_28

BeanWater_29

BeanWater_30

BeanWater_31

BeanWater_32

BeanWater_33

BeanWater_34

BeanWater_35

BeanWater_36

BeanWater_37

BeanWater_38

BeanWater_39

BeanWater_40

BeanWater_41

BeanWater_42

BeanWater_43

BeanWater_44

BeanWater_45

BeanWater_46

BeanWater_47

BeanWater_48

BeanWater_49

BeanWater_50

BeanWater_51

BeanWater_52

BeanWater_53

BeanWater_54

BeanWater_55

BeanWater_56

BeanWater_57

BeanWater_58

BeanWater_59

BeanWater_60

BeanWater_61

BeanWater_62

BeanWater_63

BeanWater_64

BeanWater_65

BeanWater_66

BeanWater_67

BeanWater_68

BeanWater_69

BeanWater_70

BeanWater_71

BeanWater_72

BeanWater_73

BeanWater_74

BeanWater_75

BeanWater_79

BeanWater_80

BeanWater_81

BeanWater_82

BeanWater_83

BeanWater_84

BeanWater_85

BeanWater_86

BeanWater_87

BeanWater_88

BeanWater_89

BeanWater_90

BeanWater_91

BeanWater_92

BeanWater_93

BeanWater_94

BeanWater_95

BeanWater_96

BeanWater_97

BeanWater_98

BeanWater_99

BeanWater_100

BeanWater_101

BeanWater_102

BeanWater_103

BeanWater_104

BeanWater_105

BeanWater_106

BeanWater_107

BeanWater_108

BeanWater_109

BeanWater_110

BeanWater_111

BeanWater_112

BeanWater_113

BeanWater_114

BeanWater_115

BeanWater_116

BeanWater_117

BeanWater_118

BeanWater_119

BeanWater_120

BeanWater_121

BeanWater_122

BeanWater_123

BeanWater_124

BeanWater_125

BeanWater_126

BeanWater_127

BeanWater_128

BeanWater_129

BeanWater_130

BeanWater_131

BeanWater_132

BeanWater_133

BeanWater_134

BeanWater_135

BeanWater_136

BeanWater_137

BeanWater_138

BeanWater_139

BeanWater_140

BeanWater_141

BeanWater_142

BeanWater_145

BeanWater_146

BeanWater_153

BeanWater_162

BeanWater_163

BeanWater_174

BeanWater_175

BeanWater_176

BeanWater_177

BeanWater_178

BeanWater_179

BeanWater_180

BeanWater_181

BeanWater_182

BeanWater_183

BeanWater_184

BeanWater_185

BeanWater_186

BeanWater_187

BeanWater_188

BeanWater_189

BeanWater_190

BeanWater_191

BeanWater_192

BeanWater_193

BeanWater_194

BeanWater_195

BeanWater_196

BeanWater_197

BeanWater_198

BeanWater_199

BeanWater_200

BeanWater_201

BeanWater_202

BeanWater_203

BeanWater_204

BeanWater_205

BeanWater_206

BeanWater_207

BeanWater_208

BeanWater_209

BeanWater_210

BeanWater_213

BeanWater_214

BeanWater_215

BeanWater_216

BeanWater_217

BeanWater_218

BeanWater_219

BeanWater_220

BeanWater_221

BeanWater_222

BeanWater_223

BeanWater_224

BeanWater_225

BeanWater_226

BeanWater_227

BeanWater_228

BeanWater_229

BeanWater_230

BeanWater_231

BeanWater_232

BeanWater_233

BeanWater_234

BeanWater_235

BeanWater_236

BeanWater_237

BeanWater_238

BeanWater_239

BeanWater_240

BeanWater_241

BeanWater_242

BeanWater_243

BeanWater_244

BeanWater_245

BeanWater_246

BeanWater_247

BeanWater_248

BeanWater_249

BeanWater_250

BeanWater_251

BeanWater_252

BeanWater_253

BeanWater_254

BeanWater_255

BeanWater_256

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload