Microbacterium phage Bernstein
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Detailed Information for Phage Bernstein
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByKerry Iles
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.444253 N, 79.953239 W Map
Naming NotesNamed after Leonard Bernstein
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 18, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage652
Genome length (bp)39926
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceACTCCCGGCA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesPlaques are clear and usually 3 mm in diameter, although there are some variable plaque sizes present
Has been Phamerated?Yes
Gene List

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Bernstein_1
(terminase, small subunit)

Bernstein_2
(terminase, large subunit)

Bernstein_3
(portal protein)

Bernstein_4
(capsid maturation protease)

Bernstein_5
(major capsid protein)

Bernstein_6

Bernstein_7
(head-to-tail adaptor)

Bernstein_8
(head-to-tail stopper)

Bernstein_9

Bernstein_10
(tail terminator)

Bernstein_11
(major tail protein)

Bernstein_12
(tail assembly chaperone)

Bernstein_13
(tail assembly chaperone)

Bernstein_14
(toxin in toxin/antitoxin system, HicA-like)

Bernstein_15
(tape measure protein)

Bernstein_16
(minor tail protein)

Bernstein_17
(minor tail protein)

Bernstein_18
(minor tail protein)

Bernstein_19
(minor tail protein)

Bernstein_20
(lysin A)

Bernstein_21

Bernstein_22
(membrane protein)

Bernstein_23

Bernstein_24

Bernstein_25
(exonuclease)

Bernstein_26

Bernstein_27

Bernstein_28
(MazG-like nucleotide pyrophosphohydrolase)

Bernstein_29
(thymidylate kinase)

Bernstein_30

Bernstein_31

Bernstein_32

Bernstein_33
(thioredoxin)

Bernstein_34
(holliday junction resolvase)

Bernstein_35

Bernstein_36

Bernstein_37

Bernstein_38

Bernstein_39
(DNA primse)

Bernstein_40
(DNA polymerase I)

Bernstein_41

Bernstein_42

Bernstein_43
(DNA-directed RNA polymerase subunit alpha)

Bernstein_44

Bernstein_45
(SprT-like domain)

Bernstein_46

Bernstein_47

Bernstein_48

Bernstein_49
(HNH endonuclease)

Bernstein_50

Bernstein_51

Bernstein_52

Bernstein_53

Bernstein_54

Bernstein_55

Bernstein_56
(thymidylate synthase)

Bernstein_57

Bernstein_58

Bernstein_59
(thymidylate synthase)

Bernstein_60

Bernstein_61

Bernstein_62

Bernstein_63

Bernstein_64

Bernstein_65

Bernstein_66

Bernstein_67

Bernstein_70
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834599
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload