Gordonia phage BetterKatz
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage BetterKatz
Discovery Information
Isolation HostGordonia terrae 3612
Former namesTheBetterKatz
Found ByRyan Katz
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.442567 N, 79.957276 W Map
Discovery NotesSoil was moist, had some mulch in it, in a shady location, 73°F, 1:10pm, 9/24/15
Naming NotesMostly my last name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 13, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage247
Genome length (bp)50636
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGCCGCGGTA
GC Content67.1%
Sequencing Noteslikely a mixed population, a small subset of reads blast 100% to Eyre
Fasta file available?Yes: Download fasta file
Characterization
ClusterDI
Subcluster--
Other Cluster Members
Plaque NotesIsometric head
Tail length around 220nm
Flexible tail
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes75
Has been Phamerated?Yes
Gene List

Click to View

BetterKatz_1
(endonuclease)

BetterKatz_2

BetterKatz_3

BetterKatz_4

BetterKatz_5
(terminase, small subunit)

BetterKatz_6
(terminase, large subunit)

BetterKatz_7
(portal protein)

BetterKatz_8
(capsid maturation protease)

BetterKatz_9
(scaffolding protein)

BetterKatz_10
(major capsid protein)

BetterKatz_11
(head-to-tail connector protein)

BetterKatz_12
(head-to-tail connector protein)

BetterKatz_13
(head-to-tail connector protein)

BetterKatz_14
(head-to-tail connector protein)

BetterKatz_15
(head-to-tail connector protein)

BetterKatz_16
(major tail protein)

BetterKatz_17

BetterKatz_18
(tail assembly chaperone)

BetterKatz_19
(tail assembly chaperone)

BetterKatz_20
(tape measure protein)

BetterKatz_21
(minor tail protein)

BetterKatz_22
(minor tail protein)

BetterKatz_23
(minor tail protein)

BetterKatz_24
(minor tail protein)

BetterKatz_25
(minor tail protein)

BetterKatz_26

BetterKatz_27

BetterKatz_28

BetterKatz_29
(lysin A, N5 cysteine protease domain)

BetterKatz_30
(lysin A, GH19 glycoside hydrolase domain)

BetterKatz_31
(holin)

BetterKatz_32
(membrane protein)

BetterKatz_33

BetterKatz_34
(antitoxin)

BetterKatz_35
(toxin)

BetterKatz_36

BetterKatz_37

BetterKatz_38

BetterKatz_39
(integrase (Y-int))

BetterKatz_40
(immunity repressor)

BetterKatz_41
(HTH DNA binding protein)

BetterKatz_42
(HTH DNA binding protein)

BetterKatz_43

BetterKatz_44

BetterKatz_45

BetterKatz_46

BetterKatz_47
(exonuclease)

BetterKatz_48

BetterKatz_49

BetterKatz_50

BetterKatz_51

BetterKatz_52

BetterKatz_53

BetterKatz_54

BetterKatz_55

BetterKatz_56

BetterKatz_57

BetterKatz_58

BetterKatz_59

BetterKatz_60

BetterKatz_61

BetterKatz_62

BetterKatz_63
(metallophosphatase)

BetterKatz_64

BetterKatz_65
(hydrolase)

BetterKatz_66
(DNA methyltransferase)

BetterKatz_67

BetterKatz_68

BetterKatz_69

BetterKatz_70
(DNA primase)

BetterKatz_71
(endonuclease VII)

BetterKatz_72

BetterKatz_73
(DNA binding protein)

BetterKatz_74
(HNH endonuclease)

BetterKatz_75

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU963261
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload