Mycobacterium phage Breeniome
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Detailed Information for Phage Breeniome
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySabreen Afzal
Year Found2011
Location FoundJericho, NY USA
Finding InstitutionCUNY, Queens College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.779001 N, 73.53291 W Map
Discovery NotesDug from three inches to the grass's dirt from the backyard of a house.
The soil was moist and cool at touch, not clumped together.
The roots of the grass were visible in the soil samples.
The grass from which the soil was taken was rocky.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2012
Approximate Shotgun Coverage144
Genome length (bp)154434
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesSize is less than one millimeter. Clear plaques (probably lytic growth).
MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes237
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Breeniome_1

Breeniome_2

Breeniome_3
(nucleotidyltransferase)

Breeniome_4

Breeniome_5

Breeniome_6

Breeniome_7

Breeniome_8

Breeniome_9

Breeniome_10

Breeniome_11

Breeniome_12

Breeniome_13

Breeniome_14

Breeniome_15

Breeniome_16

Breeniome_17

Breeniome_18
(histidine triad domain protein)

Breeniome_19

Breeniome_20

Breeniome_21

Breeniome_22

Breeniome_23

Breeniome_24

Breeniome_25

Breeniome_26

Breeniome_27

Breeniome_28

Breeniome_29
(band 7 protein)

Breeniome_30

Breeniome_31

Breeniome_32

Breeniome_33

Breeniome_34

Breeniome_35

Breeniome_36

Breeniome_37

Breeniome_38

Breeniome_39

Breeniome_40

Breeniome_41

Breeniome_42

Breeniome_43

Breeniome_44

Breeniome_45

Breeniome_46

Breeniome_47

Breeniome_48

Breeniome_49

Breeniome_50

Breeniome_51

Breeniome_52

Breeniome_53

Breeniome_54

Breeniome_55

Breeniome_56

Breeniome_57

Breeniome_58

Breeniome_59

Breeniome_60

Breeniome_61

Breeniome_62

Breeniome_63

Breeniome_64
(HTH DNA binding protein)

Breeniome_65

Breeniome_66

Breeniome_67

Breeniome_68

Breeniome_69

Breeniome_70

Breeniome_71

Breeniome_72

Breeniome_73

Breeniome_74

Breeniome_75

Breeniome_76

Breeniome_77

Breeniome_78

Breeniome_79

Breeniome_80

Breeniome_81

Breeniome_82

Breeniome_83
(ParB-like domain)

Breeniome_88

Breeniome_89

Breeniome_90
(portal)

Breeniome_91

Breeniome_92

Breeniome_93
(ThyX-like domain)

Breeniome_94

Breeniome_95
(phophoesterase)

Breeniome_96
(LysM domain)

Breeniome_97

Breeniome_98

Breeniome_99
(major capsid)

Breeniome_100

Breeniome_101

Breeniome_102

Breeniome_103

Breeniome_104

Breeniome_105

Breeniome_106

Breeniome_107

Breeniome_108

Breeniome_109

Breeniome_110

Breeniome_111

Breeniome_112

Breeniome_113

Breeniome_114

Breeniome_115

Breeniome_116

Breeniome_117

Breeniome_118

Breeniome_119

Breeniome_120

Breeniome_121

Breeniome_122

Breeniome_123

Breeniome_124

Breeniome_125

Breeniome_126

Breeniome_128

Breeniome_129

Breeniome_130
(tail assembly chaperone)

Breeniome_131
(tail assembly chaperone)

Breeniome_132
(tapemeasure)

Breeniome_133

Breeniome_134

Breeniome_135

Breeniome_136
(minor tail protein)

Breeniome_137

Breeniome_138
(minor tail protein)

Breeniome_139
(baseplate J)

Breeniome_140

Breeniome_141
(HNH endonuclease)

Breeniome_142

Breeniome_143
(HNH endonuclease)

Breeniome_144

Breeniome_145

Breeniome_146

Breeniome_147

Breeniome_148

Breeniome_149

Breeniome_150

Breeniome_151

Breeniome_152

Breeniome_153

Breeniome_154

Breeniome_155

Breeniome_160

Breeniome_161
(peptidyl tRNA hydrolase)

Breeniome_175

Breeniome_177
(D-ala-D-ala carboxypeptidase)

Breeniome_178

Breeniome_188

Breeniome_189
(helicase)

Breeniome_190

Breeniome_191

Breeniome_192

Breeniome_193

Breeniome_194

Breeniome_195

Breeniome_196

Breeniome_197

Breeniome_198

Breeniome_199
(aminotransferase)

Breeniome_200

Breeniome_201

Breeniome_202

Breeniome_203
(AAA-ATPase (DnaC-like))

Breeniome_204
(DnaB-like helicase)

Breeniome_205

Breeniome_206
(DNA Primase)

Breeniome_207

Breeniome_208
(DnaJ-like domain)

Breeniome_209

Breeniome_210
(DNA polymerase III, alpha)

Breeniome_211
(RF1)

Breeniome_212
(RecA-like)

Breeniome_213

Breeniome_214

Breeniome_215

Breeniome_216
(RusA-like)

Breeniome_217

Breeniome_218

Breeniome_219

Breeniome_220

Breeniome_221

Breeniome_222

Breeniome_223

Breeniome_226

Breeniome_227

Breeniome_228

Breeniome_229

Breeniome_230

Breeniome_231

Breeniome_232

Breeniome_233

Breeniome_234
(Ro)

Breeniome_235

Breeniome_236

Breeniome_237

Breeniome_238

Breeniome_239

Breeniome_240

Breeniome_241

Breeniome_242
(glycosyl transferase)

Breeniome_243
(galactosyl transferase)

Breeniome_244
(galactosyl transferase)

Breeniome_245
(galactosyl transferase)

Breeniome_246

Breeniome_247
(glycosyl transferase)

Breeniome_248

Breeniome_249

Breeniome_250

Breeniome_251

Breeniome_252
(lysin A)

Breeniome_253
(holin)

Breeniome_254
(lysin B)

Breeniome_255
(terminase)

Breeniome_256

Breeniome_257

Breeniome_258

Breeniome_259

Breeniome_260
(polynucleotide kinase)

Breeniome_261

Breeniome_262

Breeniome_263
(ser/thr kinase)

Breeniome_264

Breeniome_265

Breeniome_266
(PurA-like)

Breeniome_267

Breeniome_268

Breeniome_269

Breeniome_270

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF006817
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload