Mycobacterium phage Catdawg
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Detailed Information for Phage Catdawg
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySarah Carzo
Year Found2011
Location FoundRadnor, PA USA
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesTaken 1 inch deep from damp soil
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 6, 2012
Sequencing FacilityDavid H. Murdock Research Institute
Shotgun Sequencing Method454 Pyrosequencing
Genome length (bp)72108
Character of genome endsUnknown
Overhang Length4 bases
Overhang SequenceGTGT
GC Content65.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterO
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesSmall plaques grew after 48 hours at 37°C.
MorphotypeSiphoviridae
Number of Genes128
Has been Phamerated?Yes
Gene List

Click to View

Catdawg_1

Catdawg_2

Catdawg_3

Catdawg_4

Catdawg_5
(DNA methylase)

Catdawg_6
(DNA methylase)

Catdawg_7

Catdawg_8

Catdawg_9
(Endo VII protein)

Catdawg_10

Catdawg_11

Catdawg_12

Catdawg_13

Catdawg_14

Catdawg_15

Catdawg_16

Catdawg_17

Catdawg_18

Catdawg_19
(DNA primase/polymerase)

Catdawg_20

Catdawg_21

Catdawg_22

Catdawg_23

Catdawg_24

Catdawg_25

Catdawg_26

Catdawg_27
(HNH endonuclease)

Catdawg_28

Catdawg_29

Catdawg_30
(terminase)

Catdawg_31
(HNH endonuclease)

Catdawg_32
(portal protein)

Catdawg_33
(O-methyl transferase)

Catdawg_34
(glycosyltransferase)

Catdawg_35
(glycosyltransferase)

Catdawg_36
(glycosyltransferase)

Catdawg_37
(capsid maturation protease)

Catdawg_38

Catdawg_39
(major capsid protein)

Catdawg_40

Catdawg_41

Catdawg_42

Catdawg_43

Catdawg_44

Catdawg_45

Catdawg_46

Catdawg_47
(major tail subunit)

Catdawg_48

Catdawg_49

Catdawg_50

Catdawg_51

Catdawg_52
(tail assembly chaperone)

Catdawg_53
(tail assembly chaperone)

Catdawg_54
(tape measure protein)

Catdawg_55
(minor tail protein)

Catdawg_56
(minor tail protein)

Catdawg_57
(minor tail protein)

Catdawg_58
(minor tail protein)

Catdawg_59
(D-ala-D-ala-carboxypeptidase)

Catdawg_60

Catdawg_61

Catdawg_62

Catdawg_63

Catdawg_64

Catdawg_65

Catdawg_66
(LysA)

Catdawg_67
(LysB)

Catdawg_68
(holin)

Catdawg_69

Catdawg_70

Catdawg_71

Catdawg_72

Catdawg_73
(HTH DNA binding protein)

Catdawg_74

Catdawg_75

Catdawg_76

Catdawg_77

Catdawg_78

Catdawg_79

Catdawg_80
(DNA pol III beta subunit)

Catdawg_81

Catdawg_82

Catdawg_83

Catdawg_84

Catdawg_85

Catdawg_86
(DNA binding domain protein)

Catdawg_87
(Ku protein)

Catdawg_88

Catdawg_89

Catdawg_90
(ParB-like protein)

Catdawg_91

Catdawg_92

Catdawg_93

Catdawg_94

Catdawg_95

Catdawg_96

Catdawg_97
(AAA ATPase)

Catdawg_98

Catdawg_99

Catdawg_100

Catdawg_101

Catdawg_102

Catdawg_103

Catdawg_104

Catdawg_105

Catdawg_106

Catdawg_107

Catdawg_108

Catdawg_109

Catdawg_110

Catdawg_111

Catdawg_112

Catdawg_113

Catdawg_114

Catdawg_115

Catdawg_116

Catdawg_117

Catdawg_118

Catdawg_119

Catdawg_120

Catdawg_121

Catdawg_122

Catdawg_123

Catdawg_124

Catdawg_125

Catdawg_126

Catdawg_127

Catdawg_128

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKF017002
Refseq NumberNC_022057
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.0e11
Pitt Freezer Box# 68
Pitt Freezer Box Grid# E5
Available Files
Restriction Digest PictureDownload
EM PictureDownload