Mycobacterium phage Cherrybomb426
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Detailed Information for Phage Cherrybomb426
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySarah Devine
Year Found2011
Location FoundNorthampton, MA USA
Finding InstitutionSmith College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.31884 N, 72.642477 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2012
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage184
Genome length (bp)41456
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCCCCATGGCAT
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterG
SubclusterG1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque Notesproduces a high titer with very small, close together plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Cherrybomb426_1
(terminase small subunit)

Cherrybomb426_2
(terminase large subunit)

Cherrybomb426_3
(portal protein)

Cherrybomb426_4
(capsid maturation protease)

Cherrybomb426_5

Cherrybomb426_6
(scaffolding protein)

Cherrybomb426_7
(major capsid protein)

Cherrybomb426_8

Cherrybomb426_9
(head-to-tail connector complex protein)

Cherrybomb426_10
(head-to-tail connector complex protein)

Cherrybomb426_11

Cherrybomb426_12

Cherrybomb426_13
(major tail protein)

Cherrybomb426_14
(tail assembly chaperone)

Cherrybomb426_15
(tail assembly chaperone)

Cherrybomb426_16
(tape measure protein)

Cherrybomb426_17
(minor tail protein)

Cherrybomb426_18
(minor tail protein)

Cherrybomb426_19
(minor tail protein)

Cherrybomb426_20
(minor tail protein)

Cherrybomb426_21
(minor tail protein)

Cherrybomb426_22
(minor tail protein)

Cherrybomb426_23

Cherrybomb426_24

Cherrybomb426_25

Cherrybomb426_26

Cherrybomb426_27
(lysin A)

Cherrybomb426_28
(lysin B)

Cherrybomb426_29
(holin)

Cherrybomb426_30

Cherrybomb426_31

Cherrybomb426_32
(integrase)

Cherrybomb426_33
(immunity repressor)

Cherrybomb426_34
(excise)

Cherrybomb426_35

Cherrybomb426_36
(membrane protein)

Cherrybomb426_37

Cherrybomb426_38
(ASC-1 transcription coactivator)

Cherrybomb426_39
(membrane protein)

Cherrybomb426_40

Cherrybomb426_41

Cherrybomb426_42
(RecE-like recombinase)

Cherrybomb426_43
(RecT-like ssDNA binding protein)

Cherrybomb426_44

Cherrybomb426_45

Cherrybomb426_46

Cherrybomb426_47

Cherrybomb426_48

Cherrybomb426_49

Cherrybomb426_50

Cherrybomb426_51
(RuvC-like resolvase)

Cherrybomb426_52

Cherrybomb426_53

Cherrybomb426_54

Cherrybomb426_55

Cherrybomb426_56

Cherrybomb426_57

Cherrybomb426_58

Cherrybomb426_59

Cherrybomb426_60

Cherrybomb426_61
(HNH endonuclease)

Cherrybomb426_62

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH590605
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator SMTH
Pitt Freezer Box# 27
Pitt Freezer Box Grid# 76
Available Files
GenBank File for PhameratorDownload