The Actinobacteriophage Database | Phage Cherrybomb426

Mycobacterium phage Cherrybomb426

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Detailed Information for Phage Cherrybomb426
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Sarah Devine
Year Found	2011
Location Found	Northampton, MA USA
Finding Institution	Smith College
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	42.31884 N, 72.642477 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Feb 10, 2012
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Ion Torrent Sequencing
Approximate Shotgun Coverage	184
Genome length (bp)	41456
Character of genome ends	3' Sticky Overhang
Overhang Length	11 bases
Overhang Sequence	CCCCATGGCAT
GC Content	66.7%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	G
Subcluster	G1
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Angel (G1) Annihilator (G1) Aroostook (G1) Avrafan (G1) Barkley26 (G1) BPs (G1) BQuat (G1) BruceB (G1) Camri (G1) CassieYates (G1) Cedasite (G1) Chance64 (G1) Cherrybomb426 (G1) CLED96 (G1) Coleslaw (G1) Crespo (G1) Darionha (G1) DMoney (G1) ECartman (G1) Frosty24 (G1) Gideon (G1) GoldenAsh (G1) Gomashi (G1) Grizzly (G1) Halo (G1) Hope (G1) Hotshotbaby7 (G1) Jane (G1) Jolene (G1) Jonghyun (G1) JorRay (G1) Kareem (G1) Kasen3 (G1) Liefie (G1) LouisV14 (G1) Marmie (G1) Mowgli (G1) OctaviousRex (G1) Olga (G1) Paito (G1) Peeb (G1) Periodt (G1) Phish (G1) Phreak (G1) PinkYoshi (G1) Plagueis (G1) Rabbs (G1) Remy19 (G1) Renaissance (G1) Schiebel (G1) ShaboiShabazz (G1) Sizemore (G1) Sneeze (G1) Sweets (G1) Taheera (G1) Terror (G1) TomBrady (G1) ZoMa (G1) Zombie (G1) Avocado (G2) Cambiare (G2) FlagStaff (G2) Pace1224 (G2) MOOREtheMARYer (G3) Pinnie (G3) Jolie2 (G4) Lemuria (G4) Mercurio (G4) Antsirabe (G5) Stargaze (G5)
Annotating Institution	La Salle University
Annotation Status	In GenBank
Plaque Notes	produces a high titer with very small, close together plaques
Morphotype	Siphoviridae
Has been Phamerated?	Yes
Gene List	Click to View Cherrybomb426_1 (terminase small subunit) Cherrybomb426_2 (terminase large subunit) Cherrybomb426_3 (portal protein) Cherrybomb426_4 (capsid maturation protease) Cherrybomb426_5 Cherrybomb426_6 (scaffolding protein) Cherrybomb426_7 (major capsid protein) Cherrybomb426_8 Cherrybomb426_9 (head-to-tail adaptor) Cherrybomb426_10 (head-to-tail stopper) Cherrybomb426_11 Cherrybomb426_12 (tail terminator) Cherrybomb426_13 (major tail protein) Cherrybomb426_14 (tail assembly chaperone) Cherrybomb426_15 (tail assembly chaperone) Cherrybomb426_16 (tape measure protein) Cherrybomb426_17 (minor tail protein) Cherrybomb426_18 (minor tail protein) Cherrybomb426_19 (minor tail protein) Cherrybomb426_20 (minor tail protein) Cherrybomb426_21 (minor tail protein) Cherrybomb426_22 (minor tail protein) Cherrybomb426_23 Cherrybomb426_24 Cherrybomb426_25 Cherrybomb426_26 Cherrybomb426_27 (lysin A) Cherrybomb426_28 (lysin B) Cherrybomb426_29 (holin) Cherrybomb426_30 Cherrybomb426_31 Cherrybomb426_32 (integrase) Cherrybomb426_33 (immunity repressor) Cherrybomb426_34 (excise) Cherrybomb426_35 Cherrybomb426_36 Cherrybomb426_37 Cherrybomb426_38 (ASC-1 transcription coactivator) Cherrybomb426_39 Cherrybomb426_40 Cherrybomb426_41 Cherrybomb426_42 (RecE-like recombinase) Cherrybomb426_43 (RecT-like ssDNA binding protein) Cherrybomb426_44 Cherrybomb426_45 Cherrybomb426_46 Cherrybomb426_47 Cherrybomb426_48 Cherrybomb426_49 Cherrybomb426_50 Cherrybomb426_51 (RuvC-like resolvase) Cherrybomb426_52 Cherrybomb426_53 Cherrybomb426_54 Cherrybomb426_55 Cherrybomb426_56 Cherrybomb426_57 Cherrybomb426_58 Cherrybomb426_59 Cherrybomb426_60 Cherrybomb426_61 (HNH endonuclease) Cherrybomb426_62
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MH590605
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
SEA Designator	SMTH
Pitt Freezer Box#	27
Pitt Freezer Box Grid#	76
Available Files
GenBank File for Phamerator	Download

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