Rhodococcus phage CosmicSans
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Detailed Information for Phage CosmicSans
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found BySarah Belay
Year Found2014
Location FoundWilliamsburg, VA United States
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates37.282925 N, 76.664688 W Map
Discovery NotesThis phage was discovered in soil from compost.
Naming NotesThe clear plaques made the plate look like a sky full of stars, in other words "cosmic". The rest of the name can be attributed to a play on words regarding the popular font "Comic Sans".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage4039
Genome length (bp)46596
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCCGTGAT
End Determination NotesBuildups of reads in Illumina shotgun sequencing.
GC Content58.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesPlaques were very clear and were mostly the same size.
MorphotypeSiphoviridae
Number of Genes66
Number of tRNAs3
Has been Phamerated?Yes
Gene List

Click to View

CosmicSans_1

CosmicSans_2

CosmicSans_3
(terminase small subunit)

CosmicSans_7
(lysin)

CosmicSans_8
(terminase large subunit)

CosmicSans_9
(portal protein)

CosmicSans_10
(capsid morphogenesis protein)

CosmicSans_11

CosmicSans_12
(major capsid protein)

CosmicSans_13

CosmicSans_14
(head-tail connector)

CosmicSans_15
(head-tail connector)

CosmicSans_16

CosmicSans_17

CosmicSans_18
(major tail protein)

CosmicSans_19
(tail assembly chaperone)

CosmicSans_20
(tail assembly chaperone)

CosmicSans_21
(tapemeasure)

CosmicSans_22
(minor tail protein)

CosmicSans_23
(minor tail protein)

CosmicSans_24

CosmicSans_25
(holin)

CosmicSans_26

CosmicSans_27

CosmicSans_28

CosmicSans_29
(integrase)

CosmicSans_30
(excise)

CosmicSans_31

CosmicSans_32
(deaminase)

CosmicSans_33

CosmicSans_34

CosmicSans_35

CosmicSans_36
(DNA polymerase I)

CosmicSans_37
(HTH DNA binding protein)

CosmicSans_38
(thymidylate synthase)

CosmicSans_39

CosmicSans_40

CosmicSans_41
(ribonucleotide reductase)

CosmicSans_42

CosmicSans_43
(DNA binding protein)

CosmicSans_44
(serine/threonine phosphatase)

CosmicSans_45

CosmicSans_46
(glutaredoxin)

CosmicSans_47

CosmicSans_48
(DNA primase/helicase)

CosmicSans_49
(DNA primase/helicase)

CosmicSans_50

CosmicSans_51
(recombination endonuclease VII)

CosmicSans_52

CosmicSans_53
(DnaB-like helicase)

CosmicSans_54

CosmicSans_55

CosmicSans_56
(nuclease)

CosmicSans_57

CosmicSans_58
(HTH DNA-binding protein)

CosmicSans_59

CosmicSans_60

CosmicSans_61

CosmicSans_62

CosmicSans_63

CosmicSans_64
(ArdA)

CosmicSans_65

CosmicSans_66

CosmicSans_67

CosmicSans_68

CosmicSans_69

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT372002
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.84 x 10^8 PFU/mL
Date of SEA Lysate Titering Nov 4, 2014
Pitt Freezer Box# 9
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
EM PictureDownload