Mycobacterium phage Cosmo
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Detailed Information for Phage Cosmo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJared Mackenzie
Year Found2012
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates29.834139 S, 30.910721 E Map
Discovery NotesThe soil was moist, well fertilised top soil, found near a nature reserve.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 15, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage296
Sanger Finishing Reactions5
Genome length (bp)78229
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCACTGCAAC
GC Content56.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterV
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques were medium sized and turbid, and exhibited comit formation.
MorphotypeSiphoviridae
Number of Genes148
Number of tRNAs24
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Cosmo_1

Cosmo_2

Cosmo_3

Cosmo_4

Cosmo_5

Cosmo_6

Cosmo_7

Cosmo_8
(PolyA polymerase)

Cosmo_9

Cosmo_10

Cosmo_11
(methyltransferase)

Cosmo_12

Cosmo_13
(LexA-like DNA binding domain protein)

Cosmo_14

Cosmo_15

Cosmo_16

Cosmo_17

Cosmo_18

Cosmo_19

Cosmo_20

Cosmo_21

Cosmo_22

Cosmo_23

Cosmo_24

Cosmo_25

Cosmo_26
(terminase large subunit)

Cosmo_27
(portal protein)

Cosmo_28
(capsid assembly protease)

Cosmo_29
(scaffolding protein)

Cosmo_30
(capsid protein)

Cosmo_31

Cosmo_32

Cosmo_33

Cosmo_34

Cosmo_35
(major tail subunit)

Cosmo_36
(tail assembly chaperone)

Cosmo_37
(tail assembly chaperone)

Cosmo_38
(tapemeaure)

Cosmo_39
(minor tail protein)

Cosmo_40
(minor tail protein)

Cosmo_41

Cosmo_42

Cosmo_43
(minor tail protein)

Cosmo_44
(minor tail protein)

Cosmo_45
(minor tail protein)

Cosmo_46

Cosmo_47

Cosmo_48

Cosmo_49
(lysin A)

Cosmo_50

Cosmo_51
(holin)

Cosmo_52
(lysin B)

Cosmo_53
(NrdH)

Cosmo_54

Cosmo_55

Cosmo_56

Cosmo_57

Cosmo_58
(NrdC)

Cosmo_59

Cosmo_60

Cosmo_61

Cosmo_62

Cosmo_63

Cosmo_64

Cosmo_65
(Erf)

Cosmo_66

Cosmo_67

Cosmo_68

Cosmo_69
(Clp protease)

Cosmo_70

Cosmo_71

Cosmo_72

Cosmo_73

Cosmo_74

Cosmo_75

Cosmo_76

Cosmo_77

Cosmo_78
(ssDNA binding domain protein)

Cosmo_79

Cosmo_80
(Dna B-like helicase)

Cosmo_81

Cosmo_82

Cosmo_83

Cosmo_84

Cosmo_85

Cosmo_86
(WhiB)

Cosmo_87

Cosmo_88

Cosmo_89

Cosmo_90

Cosmo_91
(DNA Q-like protein)

Cosmo_92

Cosmo_93

Cosmo_94
(tyrosine phosphatase)

Cosmo_95

Cosmo_96

Cosmo_97

Cosmo_98
(HNH endonuclease domain protein)

Cosmo_99

Cosmo_101
(HNH endonuclease domain protein)

Cosmo_104

Cosmo_107

Cosmo_118
(HNH endonuclease)

Cosmo_126

Cosmo_130

Cosmo_131

Cosmo_132

Cosmo_133

Cosmo_134

Cosmo_135

Cosmo_136

Cosmo_137
(DnaQ-like protein)

Cosmo_138
(phosphoesterase)

Cosmo_139

Cosmo_140

Cosmo_141

Cosmo_142

Cosmo_143

Cosmo_144

Cosmo_145

Cosmo_146

Cosmo_147

Cosmo_148

Cosmo_149

Cosmo_150

Cosmo_151

Cosmo_152

Cosmo_153

Cosmo_154

Cosmo_155

Cosmo_156

Cosmo_157

Cosmo_158

Cosmo_159

Cosmo_160

Cosmo_161

Cosmo_162

Cosmo_163

Cosmo_164

Cosmo_165

Cosmo_166

Cosmo_167

Cosmo_168

Cosmo_169

Cosmo_170

Cosmo_171

Cosmo_172

Cosmo_173

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKP027195
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 7
Pitt Freezer Box Grid# B11
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload