| Detailed Information for Phage DTDevon |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | David Temme |
| Year Found | 2012 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | Saint Joseph's University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 39.969769 N, 75.193753 W Map |
| Discovery Notes | The soil sample was taken from the Red Panda exhibit at the Philadelphia Zoo from moist wood chips. Soil sample depth was approximately 2 centimeters. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 15, 2013 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Ion Torrent Sequencing |
| Approximate Shotgun Coverage | 400 |
| Sanger Finishing Reactions | 10 |
| Genome length (bp) | 156754 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Other Cluster Members |
|
| Plaque Notes | Plaques were very turbid and appeared after approximately 24 hours. Mean plaque size was 1 mm. |
| Morphotype | Myoviridae |
| Final annotation complete? | Yes |
| Number of Genes | 234 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KT365398 |
| Refseq Number | None yet |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |