Mycobacterium phage Dandelion
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Detailed Information for Phage Dandelion
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCharissa Naidoo
Year Found2010
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.55 S, 31.19 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 25, 2011
Genome length (bp)157568
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes241
Number of tRNAs32
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Dandelion_274
(locus tag DANDELION_274; coding region disrupted due to circularly permuted genome)

Dandelion_1
(nucleotidyltransferase)

Dandelion_2

Dandelion_3

Dandelion_4

Dandelion_5

Dandelion_6

Dandelion_7

Dandelion_8

Dandelion_9

Dandelion_10

Dandelion_11

Dandelion_12

Dandelion_13

Dandelion_14

Dandelion_15

Dandelion_16

Dandelion_17

Dandelion_18

Dandelion_19

Dandelion_20

Dandelion_21

Dandelion_22

Dandelion_23

Dandelion_24

Dandelion_25

Dandelion_26

Dandelion_27

Dandelion_28

Dandelion_29

Dandelion_30

Dandelion_31
(band 7 protein)

Dandelion_32

Dandelion_33

Dandelion_34

Dandelion_35

Dandelion_36

Dandelion_37

Dandelion_38

Dandelion_39

Dandelion_40

Dandelion_41

Dandelion_42

Dandelion_43

Dandelion_44

Dandelion_45

Dandelion_46

Dandelion_47

Dandelion_48

Dandelion_49

Dandelion_50

Dandelion_51

Dandelion_52

Dandelion_53

Dandelion_54

Dandelion_55

Dandelion_56

Dandelion_57

Dandelion_58

Dandelion_59

Dandelion_60

Dandelion_61

Dandelion_62

Dandelion_63

Dandelion_64

Dandelion_65
(DNA binding protein)

Dandelion_66

Dandelion_67

Dandelion_68

Dandelion_69

Dandelion_70

Dandelion_71

Dandelion_72

Dandelion_73

Dandelion_74

Dandelion_75

Dandelion_76

Dandelion_77

Dandelion_78

Dandelion_79

Dandelion_80

Dandelion_81

Dandelion_82

Dandelion_83

Dandelion_84

Dandelion_85

Dandelion_86

Dandelion_87

Dandelion_88

Dandelion_89
(ParB-like nuclease domain)

Dandelion_95

Dandelion_96

Dandelion_97
(single-stranded DNA binding protein)

Dandelion_98

Dandelion_99

Dandelion_100
(ThyX)

Dandelion_101

Dandelion_102

Dandelion_103

Dandelion_104

Dandelion_105

Dandelion_106

Dandelion_107

Dandelion_108

Dandelion_109

Dandelion_110

Dandelion_111

Dandelion_112

Dandelion_113

Dandelion_114
(membrane protein)

Dandelion_115

Dandelion_116

Dandelion_117

Dandelion_118

Dandelion_119

Dandelion_120

Dandelion_121

Dandelion_122

Dandelion_123

Dandelion_124

Dandelion_125

Dandelion_126

Dandelion_127

Dandelion_128

Dandelion_129

Dandelion_130

Dandelion_131

Dandelion_132
(structural protein)

Dandelion_133
(structural protein)

Dandelion_134

Dandelion_135
(tail assembly chaperone)

Dandelion_136
(tail assembly chaperone)

Dandelion_137
(tapemeasure)

Dandelion_138

Dandelion_139

Dandelion_140

Dandelion_141

Dandelion_142

Dandelion_143
(minor tail protein)

Dandelion_144

Dandelion_145

Dandelion_146

Dandelion_147

Dandelion_148

Dandelion_149

Dandelion_150

Dandelion_151

Dandelion_152

Dandelion_153

Dandelion_154

Dandelion_155

Dandelion_156

Dandelion_157

Dandelion_158

Dandelion_160

Dandelion_163

Dandelion_164
(peptidyl-tRNA hydrolase)

Dandelion_178

Dandelion_180
(beta-lactamase)

Dandelion_181

Dandelion_194

Dandelion_195
(helicase)

Dandelion_196

Dandelion_197

Dandelion_198

Dandelion_199

Dandelion_200

Dandelion_201

Dandelion_202

Dandelion_203

Dandelion_204

Dandelion_205

Dandelion_206
(ArgD)

Dandelion_207

Dandelion_208

Dandelion_209

Dandelion_210
(DnaC)

Dandelion_211
(DnaB)

Dandelion_212

Dandelion_213
(DNA primase)

Dandelion_214

Dandelion_215
(DNA Pol III alpha subunit)

Dandelion_216

Dandelion_217
(RecA)

Dandelion_218

Dandelion_219

Dandelion_220

Dandelion_221

Dandelion_222

Dandelion_223
(RusA)

Dandelion_224

Dandelion_225

Dandelion_226

Dandelion_227

Dandelion_228

Dandelion_229

Dandelion_230

Dandelion_233

Dandelion_234

Dandelion_235

Dandelion_236

Dandelion_237

Dandelion_238

Dandelion_239
(TROVE domain protein)

Dandelion_240

Dandelion_241

Dandelion_242

Dandelion_243

Dandelion_244

Dandelion_245

Dandelion_246
(glycosyl transferase)

Dandelion_247

Dandelion_248

Dandelion_249

Dandelion_250

Dandelion_251

Dandelion_252

Dandelion_253

Dandelion_254

Dandelion_255

Dandelion_256
(lysin A)

Dandelion_257
(holin)

Dandelion_258
(lysin B)

Dandelion_259

Dandelion_260

Dandelion_261

Dandelion_262

Dandelion_263

Dandelion_264

Dandelion_265

Dandelion_266

Dandelion_267
(serine-threonine protein kinase)

Dandelion_268

Dandelion_269

Dandelion_270
(PurA)

Dandelion_271

Dandelion_272

Dandelion_273

Dandelion_274
(coding region disrupted due to circularly permuted genome)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN412588
Refseq NumberNC_023696
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
EM PictureDownload