Mycobacterium phage Darionha

BLAST and GeneMark available upon entering GPS coordinates

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Detailed Information for Phage Darionha
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAmber Abram
Year Found2017
Location FoundDetroit, MI United States
Finding InstitutionUniversity of Detroit Mercy
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesSample was collected from beneath a tree in front of Shiple Hall at the University of Detroit Mercy. Soil sample collected from 2 inches below the surface in 50 degree and sunny weather.
Naming NotesI have chosen to name this phage in honor of my dearly departed sister Darionha Tyler. Although her body has departed, her name will live on, both in my heart and in this database.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 29, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3342
Genome length (bp)41901
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCCCCATGGCAT
GC Content66.6%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterG
SubclusterG1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusAwaiting_QC
Plaque NotesPhage is lytic. Plaques were about .05 centimeters in diameter and clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 72
Pitt Freezer Box Grid# G1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload