Gordonia phage Emianna
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Detailed Information for Phage Emianna
Discovery Information
Isolation HostGordonia terrae 3612
Duplicates of this PhageSavetheB
Found ByEmily Wright and Dianna Bindelli
Year Found2016
Location FoundKenosha, WI United States
Finding InstitutionCarthage College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.625 N, 87.8204 W Map
Discovery NotesThe soil was dry and uniform in composition. The sample was taken from outside of the David Straz Center at Carthage College. The location was directly across from the theater which is located in the David Straz Center.
Naming NotesThe phage's name was derived from the names of both the founders: Emily and Dianna.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage828
Genome length (bp)68190
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCCGCGTAC
GC Content65.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCR
SubclusterCR2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesIn the undiluted sample, there were roughly 150 plaques, all of which were pinprick size. In the 10^-1 diluted sample, the majority of the plaques were pinprick-sized with one larger in size.
Has been Phamerated?Yes
Gene List

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Emianna_1
(terminase small subunit)

Emianna_2

Emianna_3

Emianna_4

Emianna_5

Emianna_6

Emianna_7

Emianna_8

Emianna_9
(HicA-like toxin)

Emianna_10

Emianna_11

Emianna_12

Emianna_13

Emianna_14

Emianna_15

Emianna_16

Emianna_17

Emianna_18

Emianna_19
(lysin B)

Emianna_20

Emianna_21
(minor tail protein)

Emianna_22

Emianna_23
(HNH endonuclease)

Emianna_24
(terminase large subunit)

Emianna_25
(portal protein)

Emianna_26
(capsid maturation protease)

Emianna_27
(scaffolding protein)

Emianna_28
(capsid decoration protein)

Emianna_29
(major capsid protein)

Emianna_30

Emianna_31

Emianna_32

Emianna_33

Emianna_34

Emianna_35
(major tail protein)

Emianna_36

Emianna_37
(tail assembly chaperone)

Emianna_38
(tail assembly chaperone)

Emianna_39
(tape measure protein)

Emianna_40
(minor tail protein)

Emianna_41
(minor tail protein)

Emianna_42
(minor tail protein)

Emianna_43
(minor tail protein)

Emianna_44

Emianna_45

Emianna_46

Emianna_47
(lysin A, peptidase domain)

Emianna_48
(lysin A, glycosyl hydrolase domain)

Emianna_49
(holin)

Emianna_50
(membrane protein)

Emianna_51

Emianna_52
(DNA primase/polymerase)

Emianna_53

Emianna_54
(WhiB family transcription factor)

Emianna_55

Emianna_56
(MerR-like HTH DNA-binding protein)

Emianna_57
(RuvC-like resolvase)

Emianna_58

Emianna_59

Emianna_60
(DnaE-like DNA polymerase III (alpha))

Emianna_61

Emianna_62

Emianna_63
(thioredoxin)

Emianna_64

Emianna_65
(AAA-ATPase)

Emianna_66
(nuclease)

Emianna_67

Emianna_68

Emianna_69

Emianna_70

Emianna_71

Emianna_72
(DNA helicase)

Emianna_73
(WhiB family transcription factor)

Emianna_74

Emianna_75

Emianna_76

Emianna_77
(helix-turn-helix DNA-binding domain protein)

Emianna_78

Emianna_79

Emianna_80

Emianna_81

Emianna_82

Emianna_83

Emianna_84

Emianna_85

Emianna_86

Emianna_87

Emianna_88

Emianna_89

Emianna_90

Emianna_91

Emianna_92

Emianna_93

Emianna_94

Emianna_95

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH779501
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 7x10^8 pfu/ml
Date of SEA Lysate Titering Oct 21, 2016
Pitt Freezer Box# 33
Pitt Freezer Box Grid# A3
Available Files
EM PictureDownload
GenBank File for PhameratorDownload