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Mycobacterium phage EniyanLRS
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Detailed Information for Phage EniyanLRS
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageMolarband
Found ByEniyan Kandasamy
Year Found2015
Location FoundNew Delhi, India
Finding InstitutionAcharya Narendra Dev College
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesIsolated from a soil sample procured from LRS Hospital, New Delhi in a state called Delhi. The protocol followed for isolation of the Mycobacteriophages was as described in the manual "Phagehunting Teacher Workshop-2012". The work was carried out in Dr.Urmi Bajpai's laboratary at Department of Biomedical Science, Acharya Narendra Dev College, University of Delhi.
Naming NotesThe name of the phage is kept by the student Eniyan Kandasamy,Ph.D Student who worked and discovered the Mycobacteriophage from the soil samples as a part of PHAGE DISCOVERY RESEARCH PROJECT (PDRP). The first six letters of "EniyanLRS" are taken from the name of the student:Eniyan and the letters LRS stands for the location in which the soil was obtained.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 3, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2144
Genome length (bp)78536
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCACTGCAAC
GC Content56.9%
Sequencing NotesAt position 64375 bp 32% of reads contain a G rather than consensus T, at position 75501 bp 33% of reads contain a C rather than consensus T, at position 75509 bp 32% of reads contain a T rather than consensus C.
Fasta file available?Yes: Download fasta file
Characterization
ClusterV
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe shape of the plaque which is clear, is circular and the size is about 3-4 mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

EniyanLRS_1

EniyanLRS_2
(tyrosine kinase)

EniyanLRS_3

EniyanLRS_4
(PolyA polymerase)

EniyanLRS_5

EniyanLRS_6

EniyanLRS_7
(methyltransferase)

EniyanLRS_8

EniyanLRS_9

EniyanLRS_10
(repressor LexA)

EniyanLRS_11

EniyanLRS_12

EniyanLRS_13

EniyanLRS_14

EniyanLRS_15

EniyanLRS_16

EniyanLRS_17

EniyanLRS_18

EniyanLRS_19

EniyanLRS_20

EniyanLRS_21

EniyanLRS_22

EniyanLRS_23
(terminase)

EniyanLRS_24
(portal protein)

EniyanLRS_25
(capsid assembly protease)

EniyanLRS_26
(scaffolding protein)

EniyanLRS_27
(capsid protein)

EniyanLRS_28

EniyanLRS_29

EniyanLRS_30

EniyanLRS_31

EniyanLRS_32
(major tail protein)

EniyanLRS_33
(tail assembly chaperone)

EniyanLRS_34
(tail assembly chaperone)

EniyanLRS_35
(minor tail protein)

EniyanLRS_36
(minor tail protein)

EniyanLRS_37
(minor tail protein)

EniyanLRS_38

EniyanLRS_39
(minor tail protein)

EniyanLRS_40
(minor tail protein)

EniyanLRS_41
(minor tail protein)

EniyanLRS_42
(minor tail protein)

EniyanLRS_43

EniyanLRS_44

EniyanLRS_45

EniyanLRS_46
(lysin A)

EniyanLRS_47

EniyanLRS_48

EniyanLRS_49
(lysin B)

EniyanLRS_50
(NrdH)

EniyanLRS_51

EniyanLRS_52

EniyanLRS_53

EniyanLRS_54

EniyanLRS_55
(NrdC)

EniyanLRS_56

EniyanLRS_57

EniyanLRS_58

EniyanLRS_60
(Erf family protein)

EniyanLRS_61

EniyanLRS_62

EniyanLRS_63

EniyanLRS_64

EniyanLRS_65
(ClpP-like protein)

EniyanLRS_66

EniyanLRS_67

EniyanLRS_68

EniyanLRS_69

EniyanLRS_70

EniyanLRS_71

EniyanLRS_72

EniyanLRS_73

EniyanLRS_74
(ssDNA binding protein)

EniyanLRS_75

EniyanLRS_76
(DnaB-like helicase)

EniyanLRS_77

EniyanLRS_78

EniyanLRS_79

EniyanLRS_80

EniyanLRS_81
(ATP binding protein)

EniyanLRS_82
(WhiB)

EniyanLRS_83

EniyanLRS_84

EniyanLRS_85

EniyanLRS_86

EniyanLRS_87

EniyanLRS_88
(DnaQ-like protein)

EniyanLRS_89

EniyanLRS_90

EniyanLRS_91
(tyrosine phosphatase)

EniyanLRS_92

EniyanLRS_93

EniyanLRS_94

EniyanLRS_95
(HNH domain family protein)

EniyanLRS_96

EniyanLRS_99

EniyanLRS_103

EniyanLRS_121

EniyanLRS_125

EniyanLRS_126

EniyanLRS_127
(phosphoribosyl transferase)

EniyanLRS_128

EniyanLRS_129
(release factor like protein)

EniyanLRS_130

EniyanLRS_131
(DnaQ)

EniyanLRS_132

EniyanLRS_133

EniyanLRS_134

EniyanLRS_135

EniyanLRS_136

EniyanLRS_137

EniyanLRS_138

EniyanLRS_139

EniyanLRS_140

EniyanLRS_141

EniyanLRS_142

EniyanLRS_143

EniyanLRS_144

EniyanLRS_145

EniyanLRS_146

EniyanLRS_147

EniyanLRS_148

EniyanLRS_149

EniyanLRS_150

EniyanLRS_151

EniyanLRS_152

EniyanLRS_153

EniyanLRS_154

EniyanLRS_155

EniyanLRS_156

EniyanLRS_157

EniyanLRS_158

EniyanLRS_159

EniyanLRS_160

EniyanLRS_161

EniyanLRS_162

EniyanLRS_163

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKY385381
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload