Gordonia phage Fairfaxidum
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Detailed Information for Phage Fairfaxidum
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAdam Persello
Year Found2017
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.444449 N, 79.952562 W Map
Discovery NotesDuring the time the soil was collected, the weather was above freezing and humid. The temperature was about 45 degrees and it was cloudy. This made it quite easy to scoop up the dirt.
Naming NotesName from childhood street.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 18, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2030
Genome length (bp)50187
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceTCGCCGGTGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Other Cluster Members
Plaque NotesPlaques tend to be medium sized (~1-2mm) and are somewhat cloudy. Sometimes the plaques vary somewhat in size.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload