Arthrobacter phage Faja
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Detailed Information for Phage Faja
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByMegan Ulbrich
Year Found2017
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.452728 N, 79.9437 W Map
Discovery NotesSoil was moist and clumpy.
Naming NotesThis phage is named after my father who I call Faja. It is an awesome phage just like he is!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 1, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage534
Genome length (bp)52490
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesFaja plaques are clear and vary in size from <1mm to 2mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Faja_1
(terminase, small subunit)

Faja_2
(terminase, large subunit (ATPase domain))

Faja_3
(terminase, large subunit (nuclease domain))

Faja_4
(portal protein)

Faja_5
(capsid maturation protease)

Faja_6
(scaffolding protein)

Faja_7
(capsid decoration protein)

Faja_8
(major capsid protein)

Faja_9

Faja_10
(head-to-tail adaptor)

Faja_11
(head-to-tail stopper)

Faja_12

Faja_13
(tail terminator)

Faja_14

Faja_15
(major tail protein)

Faja_16
(tail assembly chaperone)

Faja_17
(tail assembly chaperone)

Faja_18

Faja_19
(tape measure protein)

Faja_20
(minor tail protein)

Faja_21
(minor tail protein)

Faja_22

Faja_23
(minor tail protein)

Faja_24
(lysin A)

Faja_25
(membrane protein)

Faja_26
(minor tail protein)

Faja_27
(minor tail protein)

Faja_28

Faja_29

Faja_30

Faja_31

Faja_32
(esterase)

Faja_33

Faja_34
(membrane protein)

Faja_35
(membrane protein)

Faja_36

Faja_37

Faja_38
(HTH DNA binding protein)

Faja_39
(Integrase, (Y-int))

Faja_40

Faja_41

Faja_42

Faja_43

Faja_44

Faja_45

Faja_46

Faja_47

Faja_48

Faja_49

Faja_50

Faja_51
(helix-turn-helix DNA binding domain)

Faja_52

Faja_53

Faja_54
(HNH endonuclease)

Faja_55
(excise)

Faja_56

Faja_57

Faja_58

Faja_59

Faja_60

Faja_61

Faja_62

Faja_63

Faja_64
(helix-turn-helix DNA binding domain)

Faja_65

Faja_66

Faja_67

Faja_68

Faja_69
(exonuclease)

Faja_70

Faja_71

Faja_72
(HNH endonuclease)

Faja_73
(ssDNA binding protein)

Faja_74

Faja_75

Faja_76
(NrdH glutaredoxin)

Faja_77

Faja_78
(DNA helicase/methylase)

Faja_79
(HTH DNA binding protein)

Faja_80
(DNA polymerase III subunit beta)

Faja_81

Faja_82
(DNA methylase)

Faja_83

Faja_84

Faja_85

Faja_86
(MazG-like nucleotide pyrophosphohydrolase)

Faja_87
(RusA-like resolvase (endonuclease))

Faja_88
(exonuclease)

Faja_89

Faja_90

Faja_91

Faja_92

Faja_94

Faja_95

Faja_96
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834612
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload