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Gordonia phage Fosterous
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Detailed Information for Phage Fosterous
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRafael Alexandre
Year Found2017
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates40.4439 N, 79.9561 W Map
Discovery NotesThe soil that Fosterous was found in was in muddy and wet. This soil was in a flower bed and was mixed with fertilizer, mulch, and leaves. It was a 60 degree Fahrenheit afternoon.
Naming NotesSince I adopted this phage, it is a "foster" phage, hence "Fosterous".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 18, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage953
Genome length (bp)59136
Character of genome endsCircularly Permuted
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
SubclusterDE1
Cluster Life CycleLytic
Lysogeny NotesSince Fosterous is able to produce cloudy plaques in addition to clear plaques, it can be concluded that Fosterous is a temperate phage that produces lysogens.
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques produced by Fosterous can be either large, round, and cloudy or small and clear. Their sizes can range from 1mm to 3.5 mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Fosterous_1

Fosterous_2
(terminase)

Fosterous_3

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Fosterous_6

Fosterous_7

Fosterous_8

Fosterous_9

Fosterous_10
(portal protein)

Fosterous_11

Fosterous_12
(minor capsid protein, MuF-like domain)

Fosterous_13

Fosterous_14
(capsid maturation protease)

Fosterous_15

Fosterous_16
(HNH endonuclease)

Fosterous_17

Fosterous_18
(major capsid protein)

Fosterous_19

Fosterous_20

Fosterous_21
(major tail protein)

Fosterous_22

Fosterous_23

Fosterous_24

Fosterous_25
(head-to-tail adaptor)

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Fosterous_27

Fosterous_28

Fosterous_29
(tail assembly chaperone)

Fosterous_30

Fosterous_31
(tape measure protein)

Fosterous_32
(minor tail protein)

Fosterous_33
(minor tail protein)

Fosterous_34
(HNH endonuclease)

Fosterous_35

Fosterous_36
(minor tail protein)

Fosterous_37

Fosterous_38

Fosterous_39
(lysin A)

Fosterous_40
(membrane protein)

Fosterous_41
(membrane protein)

Fosterous_42
(membrane protein)

Fosterous_43
(lysin B)

Fosterous_44

Fosterous_45

Fosterous_46
(RecE-like exonuclease)

Fosterous_47

Fosterous_48

Fosterous_49

Fosterous_50

Fosterous_51

Fosterous_52
(RecT-like ssDNA binding protein)

Fosterous_53

Fosterous_54

Fosterous_55

Fosterous_56

Fosterous_57

Fosterous_58

Fosterous_59

Fosterous_60

Fosterous_61

Fosterous_62

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Fosterous_64

Fosterous_65

Fosterous_66

Fosterous_67

Fosterous_68

Fosterous_69

Fosterous_70

Fosterous_71
(RuvC-like resolvase)

Fosterous_72

Fosterous_73

Fosterous_74

Fosterous_75

Fosterous_76

Fosterous_77

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Fosterous_79

Fosterous_80

Fosterous_81

Fosterous_82

Fosterous_83

Fosterous_84

Fosterous_85

Fosterous_86

Fosterous_87
(DNA meythlase)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH976510
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 55
Pitt Freezer Box Grid# F10
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload