Streptomyces phage Francob
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Detailed Information for Phage Francob
Discovery Information
Isolation HostStreptomyces viridochromogenes DSM40736
Found ByFrank Chen & Jacob Longmeyer
Year Found2016
Location FoundSaint Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature26°C
GPS Coordinates38.649028 N, 90.309794 W Map
Discovery Notessoil 2 cm below surface and semi-moist
Naming NotesFrank and Jacob
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 14, 2023
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage218
Genome length (bp)128799
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length764 bp
GC Content47.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBK
SubclusterBK1
Cluster Life CycleLytic
Lysogeny Noteslikely a lytic phage
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque Notessmall, clear plaques with definite edges, slightly lumpy, variations in size
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Francob_1

Francob_2

Francob_3

Francob_4

Francob_5

Francob_6
(DNA methyltransferase)

Francob_7

Francob_8
(ThyX-like thymidylate synthase)

Francob_9

Francob_10

Francob_11

Francob_12

Francob_17
(hydrolase)

Francob_18
(glycosyltransferase)

Francob_19
(glycosyltransferase)

Francob_20
(ribonucleotide reductase)

Francob_21
(endolysin)

Francob_22

Francob_23

Francob_24
(portal protein)

Francob_25
(capsid maturation protease)

Francob_26
(major capsid protein)

Francob_27

Francob_28

Francob_29

Francob_30

Francob_31
(head-to-tail adaptor)

Francob_32
(head-to-tail stopper)

Francob_33

Francob_34
(tail terminator)

Francob_35
(major tail protein)

Francob_36
(tail assembly chaperone)

Francob_37
(tail assembly chaperone)

Francob_38
(tape measure protein)

Francob_39
(minor tail protein)

Francob_40
(minor tail protein)

Francob_41

Francob_42
(minor tail protein)

Francob_43
(minor tail protein)

Francob_44

Francob_45

Francob_46

Francob_47
(HNH endonuclease)

Francob_48
(metallophosphoesterase)

Francob_49

Francob_50
(helix-turn-helix DNA binding domain)

Francob_51

Francob_52

Francob_53

Francob_54
(helicase)

Francob_55

Francob_56
(DNA primase)

Francob_57
(DNA binding protein)

Francob_58
(HNH endonuclease)

Francob_59
(DnaE-like DNA polymerase III (alpha))

Francob_60

Francob_61
(MazG-like nucleotide pyrophosphohydrolase)

Francob_62

Francob_63
(RecA-like DNA recombinase)

Francob_64

Francob_65

Francob_66
(PnuC-like Nicotinamide riboside transporter)

Francob_67
(Holliday junction resolvase)

Francob_68

Francob_69

Francob_70
(Cas4 exonuclease)

Francob_71

Francob_72
(RuvC-like resolvase)

Francob_73

Francob_74
(DprA-like ssDNA binding protein)

Francob_75
(helix-turn-helix DNA binding domain)

Francob_76
(glycosyltransferase)

Francob_77
(glycosyltransferase)

Francob_78
(nucleotidyl transferase)

Francob_79

Francob_80
(exonuclease)

Francob_81
(deoxynucleoside monophosphate kinase)

Francob_82
(phosphatase)

Francob_83

Francob_84

Francob_85

Francob_86

Francob_87
(terminase)

Francob_88

Francob_89

Francob_92

Francob_93
(HNH endonuclease)

Francob_94

Francob_99

Francob_101

Francob_102

Francob_103

Francob_104
(Ro-like RNA binding protein)

Francob_105

Francob_106

Francob_108
(DnaQ-like (DNA polymerase III subunit))

Francob_109

Francob_110

Francob_112

Francob_114

Francob_117

Francob_119

Francob_120

Francob_121

Francob_122

Francob_125

Francob_129

Francob_130

Francob_132

Francob_134

Francob_135
(membrane protein, Band-7 -like)

Francob_136

Francob_137

Francob_138

Francob_139

Francob_141

Francob_142

Francob_143

Francob_144

Francob_145

Francob_147

Francob_148

Francob_149
(RNA ligase)

Francob_150

Francob_151

Francob_152
(polynucleotide kinase)

Francob_153

Francob_154

Francob_156

Francob_157

Francob_158

Francob_159

Francob_162

Francob_163

Francob_164

Francob_165

Francob_166

Francob_167
(ADP-ribosyltransferase)

Francob_168
(rIIA-like protein)

Francob_169
(rIIB-like protein)

Francob_170
(phosphoesterase)

Francob_171

Francob_173

Francob_174
(WhiB family transcription factor)

Francob_175

Francob_176

Francob_177

Francob_179

Francob_180

Francob_181

Francob_184

Francob_186

Francob_187

Francob_189

Francob_191

Francob_192

Francob_193

Francob_194

Francob_195

Francob_196

Francob_197

Francob_198

Francob_199
(thioredoxin)

Francob_200

Francob_201

Francob_202

Francob_203

Francob_204

Francob_205

Francob_206

Francob_207

Francob_208

Francob_209

Francob_210

Francob_211
(RNA ligase)

Francob_212

Francob_213

Francob_214

Francob_215

Francob_216

Francob_217

Francob_218

Francob_219

Francob_220

Francob_221
(Lsr2-like DNA bridging protein)

Francob_222

Francob_223

Francob_224

Francob_225

Francob_226

Francob_227

Francob_228

Francob_229
(HNH endonuclease)

Francob_230

Francob_231

Francob_232

Francob_233

Francob_234
(peptidase)

Francob_235

Francob_236

Francob_237

Francob_238

Francob_239

Francob_240

Francob_241

Francob_242
(metallophosphatase)

Francob_243

Francob_244
(SprT-like protease)

Francob_245

Francob_246

Francob_247

Francob_248

Francob_249

Francob_250

Francob_251

Francob_252

Francob_253

Francob_254

Francob_255

Francob_256

Francob_257

Francob_258

Francob_259

Francob_260

Francob_261

Francob_262

Francob_263

Francob_264

Francob_265

Francob_266

Francob_267

Francob_268

Francob_269

Francob_270

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP537961
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 6.1x10^9 pfu/mL
Date of SEA Lysate Titering Oct 6, 2016
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload