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Mycobacterium phage Gabriel
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Detailed Information for Phage Gabriel
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMichael Matassa
Year Found2012
Location FoundProvidence, RI USA
Finding InstitutionProvidence College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.843514 N, 71.438664 W Map
Discovery NotesSoil Sample
Deep
2-3inches
63 deg.F
Naming NotesPhage Designation:
2012PROVgabrielMM
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 5, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage875
Genome length (bp)154474
Character of genome endsCircularly Permuted
GC Content64.8%
Sequencing NotesThis genome has a long run of Cs, the precise length of which cannot be determined and/or may not even exist. We reported 27 Cs as a best-guess length.
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

MorphotypeMyoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Gabriel_1

Gabriel_2

Gabriel_3
(nucleotidyl transferase)

Gabriel_4

Gabriel_5

Gabriel_6

Gabriel_7

Gabriel_8

Gabriel_9

Gabriel_10

Gabriel_11

Gabriel_12

Gabriel_13

Gabriel_14

Gabriel_15

Gabriel_16

Gabriel_17

Gabriel_18
(histidine triad nucleotide binding protein)

Gabriel_19

Gabriel_20

Gabriel_21

Gabriel_22

Gabriel_23

Gabriel_24

Gabriel_25

Gabriel_26

Gabriel_27

Gabriel_28

Gabriel_29
(membrane protein, Band-7-like)

Gabriel_30

Gabriel_31
(helix-turn-helix DNA binding domain)

Gabriel_32

Gabriel_33

Gabriel_34

Gabriel_35
(DNA binding domain)

Gabriel_36
(DNA binding domain)

Gabriel_37

Gabriel_38

Gabriel_39

Gabriel_40

Gabriel_41

Gabriel_42

Gabriel_43

Gabriel_44

Gabriel_45

Gabriel_46

Gabriel_47

Gabriel_48

Gabriel_49

Gabriel_50

Gabriel_51

Gabriel_52

Gabriel_53

Gabriel_54

Gabriel_55

Gabriel_56

Gabriel_57

Gabriel_58

Gabriel_59

Gabriel_60

Gabriel_61

Gabriel_62

Gabriel_63

Gabriel_64

Gabriel_65
(helix-turn-helix DNA binding domain)

Gabriel_66

Gabriel_67

Gabriel_68

Gabriel_69

Gabriel_70

Gabriel_71

Gabriel_72

Gabriel_73

Gabriel_74

Gabriel_75

Gabriel_76

Gabriel_77

Gabriel_78

Gabriel_79

Gabriel_80

Gabriel_81

Gabriel_82

Gabriel_83

Gabriel_84

Gabriel_85
(ParB-like domain)

Gabriel_90

Gabriel_91

Gabriel_92
(portal protein)

Gabriel_93

Gabriel_94

Gabriel_95
(ThyX thymidylate synthase)

Gabriel_96

Gabriel_97
(RNA ligase)

Gabriel_98
(endolysin, LysM-like)

Gabriel_99

Gabriel_100

Gabriel_101
(major capsid protein)

Gabriel_102

Gabriel_103

Gabriel_104

Gabriel_105

Gabriel_106
(glycosylase/DNA lyase)

Gabriel_107

Gabriel_108

Gabriel_109

Gabriel_110

Gabriel_111

Gabriel_112

Gabriel_113

Gabriel_114

Gabriel_115

Gabriel_116

Gabriel_117

Gabriel_118

Gabriel_119

Gabriel_120
(hydrolase)

Gabriel_121
(N-acetyltransferase)

Gabriel_122

Gabriel_123

Gabriel_124

Gabriel_125

Gabriel_126

Gabriel_127
(tail sheath protein)

Gabriel_128
(structural protein)

Gabriel_129

Gabriel_130
(tail assembly chaperone)

Gabriel_131
(tail assembly chaperone)

Gabriel_132
(tape measure protein)

Gabriel_133

Gabriel_134

Gabriel_135

Gabriel_136
(minor tail protein)

Gabriel_137

Gabriel_138
(minor tail protein)

Gabriel_139
(tail lysozyme/baseplate)

Gabriel_140
(baseplate J protein)

Gabriel_141

Gabriel_142

Gabriel_143

Gabriel_144

Gabriel_145
(minor tail protein)

Gabriel_146

Gabriel_147

Gabriel_148

Gabriel_149

Gabriel_150

Gabriel_151

Gabriel_152

Gabriel_153

Gabriel_154

Gabriel_158

Gabriel_159
(peptidyl tRNA hydrolase)

Gabriel_174
(HNH endonuclease)

Gabriel_176
(minor tail protein, D-ala-D-ala-carboxypeptidase)

Gabriel_177

Gabriel_190

Gabriel_191
(helicase)

Gabriel_192

Gabriel_193

Gabriel_194

Gabriel_195

Gabriel_196

Gabriel_197

Gabriel_198

Gabriel_199

Gabriel_200
(thymidylate kinase)

Gabriel_201
(Aspartate aminotransferase)

Gabriel_202
(RNA binding protein (Hfq-like))

Gabriel_203

Gabriel_204

Gabriel_205
(AAA-ATPase)

Gabriel_206
(DnaB dsDNA helicase)

Gabriel_207

Gabriel_208
(DnaG DNA primase)

Gabriel_209

Gabriel_210
(chaperonin, DnaJ-like domain)

Gabriel_211
(ssDNA binding protein)

Gabriel_212
(DnaE DNA polymerase III (alpha subunit))

Gabriel_213
(RF-1 peptide chain release factor)

Gabriel_214
(RecA DNA recombinase)

Gabriel_215
(Holliday junction resolvase)

Gabriel_216

Gabriel_217
(HNH endonuclease)

Gabriel_218
(RusA-like protein)

Gabriel_219

Gabriel_220

Gabriel_221

Gabriel_222

Gabriel_223

Gabriel_224

Gabriel_225

Gabriel_228

Gabriel_229

Gabriel_230

Gabriel_231

Gabriel_232

Gabriel_233

Gabriel_234

Gabriel_235

Gabriel_236
(Ro RNA binding protein)

Gabriel_237

Gabriel_238

Gabriel_239

Gabriel_240

Gabriel_241
(hydrolase)

Gabriel_242

Gabriel_243
(glycosyltransferase)

Gabriel_244

Gabriel_245
(glyosyltransferase)

Gabriel_246
(galactosyltransferase)

Gabriel_247
(nicotinamide riboside transporter)

Gabriel_248
(glycosyltransferase)

Gabriel_249

Gabriel_250

Gabriel_251

Gabriel_252

Gabriel_253
(lysin A)

Gabriel_254
(holin)

Gabriel_255
(lysin B)

Gabriel_256
(terminase)

Gabriel_257

Gabriel_258

Gabriel_259

Gabriel_260

Gabriel_261
(polynucleotide kinase)

Gabriel_262

Gabriel_263

Gabriel_264
(Ser/Thr kinase)

Gabriel_265

Gabriel_266

Gabriel_267
(Adenylosuccinate synthetase PurA-like protein)

Gabriel_268

Gabriel_269

Gabriel_270

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX781992
Refseq NumberNone yet
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload