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Gordonia phage Gambino
Gambino Plaque Picture
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Detailed Information for Phage Gambino
Discovery Information
Isolation HostGordonia terrae 3612
Found ByNeha Gupta
Year Found2017
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.44 N, 79.96 W Map
Discovery NotesI discovered this phage from a soil sample collected on Sunday, January 8, 2017 outside Mark A. Nordenberg Hall. The weather was cold around 35 degrees fahrenheit, and the top of the soil was covered in snow with certain areas frozen.
Naming NotesI wanted him to have a fun name since he's an enjoyable phage I think.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 22, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1511
Genome length (bp)53622
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Other Cluster Members
Plaque NotesThe plaques from this phage make relatively small clearings around 2mm in size. They are all roughly the same circular shape. Also, they are clear rather than cloudy in appearance.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Restriction Digest PictureDownload
EM PictureDownload