Mycobacterium phage GenevaB15
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Detailed Information for Phage GenevaB15
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByBritney Taylor
Year Found2015
Location FoundFreedom , PA USA
Finding InstitutionSeton Hill University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.684444 N, 80.251667 W Map
Discovery NotesThe soil sample as collected from my grandmothers yard. The soil collected is adjacent from the tree house that use when I was a small child. The appearance of the soil was dry, crumbly and off black color. The bacteriophage phage came from a direct plate and the sample was shaken for 48 hours at room temperature before the direct plate was formed.
Naming NotesI named my bacteriophage GenevaB15 in honor of my grandmother. The sample was collected at my grandmother front yard.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 17, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1993
Genome length (bp)80123
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCCCATGCAA
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterM
SubclusterM2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesSmall tiny cloudy plaques that are 1mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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GenevaB15_1

GenevaB15_2

GenevaB15_3

GenevaB15_4
(Lsr2-like DNA bridging protein)

GenevaB15_5

GenevaB15_6

GenevaB15_7

GenevaB15_8

GenevaB15_9

GenevaB15_10

GenevaB15_11

GenevaB15_12

GenevaB15_13

GenevaB15_14

GenevaB15_15

GenevaB15_16

GenevaB15_17
(terminase small subunit)

GenevaB15_18
(terminase large subunit)

GenevaB15_19
(portal protein)

GenevaB15_20
(MuF-like minor capsid protein)

GenevaB15_21
(scaffolding protein)

GenevaB15_22
(major capsid protein)

GenevaB15_23
(head-to-tail adaptor)

GenevaB15_24
(head-to-tail stopper)

GenevaB15_25

GenevaB15_26
(tail terminator)

GenevaB15_27
(major tail protein)

GenevaB15_28
(tail assembly chaperone)

GenevaB15_29
(tail assembly chaperone)

GenevaB15_30
(tape measure protein)

GenevaB15_31
(minor tail protein)

GenevaB15_32
(minor tail protein)

GenevaB15_33
(minor tail protein)

GenevaB15_34
(minor tail protein)

GenevaB15_35
(minor tail protein)

GenevaB15_36
(minor tail protein)

GenevaB15_37

GenevaB15_38

GenevaB15_39
(minor tail protein)

GenevaB15_40
(lysin A)

GenevaB15_41

GenevaB15_42
(holin)

GenevaB15_43
(lysin B)

GenevaB15_44
(NrdH-like glutaredoxin)

GenevaB15_45

GenevaB15_46

GenevaB15_47

GenevaB15_48

GenevaB15_49

GenevaB15_50

GenevaB15_51

GenevaB15_52

GenevaB15_53

GenevaB15_54
(nucleotidyltransferase)

GenevaB15_55

GenevaB15_56

GenevaB15_57

GenevaB15_58

GenevaB15_59

GenevaB15_60
(ERF family ssDNA binding protein)

GenevaB15_61

GenevaB15_62

GenevaB15_63

GenevaB15_64

GenevaB15_65
(ClpP-like protease)

GenevaB15_66

GenevaB15_67

GenevaB15_68

GenevaB15_69

GenevaB15_70

GenevaB15_71

GenevaB15_72

GenevaB15_73

GenevaB15_74

GenevaB15_75
(ssDNA binding protein)

GenevaB15_76

GenevaB15_77
(DnaB-like dsDNA helicase)

GenevaB15_78

GenevaB15_79
(holliday junction resolvase)

GenevaB15_80
(WhiB family transcription factor)

GenevaB15_81

GenevaB15_82

GenevaB15_83

GenevaB15_84

GenevaB15_85

GenevaB15_86

GenevaB15_87

GenevaB15_88

GenevaB15_89
(DnaQ-like DNA polymerase III subunit)

GenevaB15_90

GenevaB15_91

GenevaB15_92

GenevaB15_93

GenevaB15_94
(HNH endonuclease)

GenevaB15_95

GenevaB15_96

GenevaB15_97

GenevaB15_98

GenevaB15_99

GenevaB15_100

GenevaB15_101

GenevaB15_102
(HNH endonuclease)

GenevaB15_103

GenevaB15_108

GenevaB15_114

GenevaB15_117

GenevaB15_121

GenevaB15_132

GenevaB15_133

GenevaB15_134
(RtcB-like RNA ligase)

GenevaB15_135

GenevaB15_136
(PTPc tyrosine phosphatase)

GenevaB15_137

GenevaB15_138

GenevaB15_139

GenevaB15_140

GenevaB15_141

GenevaB15_142
(DprA-like DNA processing chain A)

GenevaB15_143

GenevaB15_144
(metallophosphoesterase)

GenevaB15_145

GenevaB15_146

GenevaB15_147

GenevaB15_148
(serine integrase)

GenevaB15_149

GenevaB15_150

GenevaB15_151

GenevaB15_152

GenevaB15_153

GenevaB15_154

GenevaB15_155

GenevaB15_156

GenevaB15_157

GenevaB15_158

GenevaB15_159

GenevaB15_160

GenevaB15_161

GenevaB15_162

GenevaB15_163

GenevaB15_164

GenevaB15_165

GenevaB15_166

GenevaB15_167

GenevaB15_168

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF319184
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 21
Pitt Freezer Box Grid# G9
Available Files
GenBank File for PhameratorDownload