Rhodococcus phage Grayson
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Detailed Information for Phage Grayson
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByRachael Rush
Year Found2014
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.441761 N, 79.955919 W Map
Discovery NotesFound in soil on a warm day outside Barco Law building. The soil was fairly dry.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 8, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage143
Genome length (bp)131801
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length2900 bp
End Determination NotesDouble-coverage region flanked by read buildups in Illumina sequencing data.
GC Content41.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

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Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesVery tiny pinprick clear plaques.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Grayson_1

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Grayson_7

Grayson_8

Grayson_9

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Grayson_12

Grayson_13

Grayson_14

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Grayson_18

Grayson_19

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Grayson_21

Grayson_22

Grayson_23

Grayson_24

Grayson_25

Grayson_26

Grayson_27

Grayson_28

Grayson_29

Grayson_30

Grayson_31
(lysin B)

Grayson_32

Grayson_33

Grayson_34

Grayson_35

Grayson_36

Grayson_37

Grayson_38

Grayson_39

Grayson_40

Grayson_41

Grayson_42

Grayson_43
(ThyX-like thymidylate synthase)

Grayson_44

Grayson_45

Grayson_46

Grayson_47

Grayson_48

Grayson_49
(methyltransferase)

Grayson_50

Grayson_51

Grayson_52

Grayson_53

Grayson_54

Grayson_55

Grayson_56

Grayson_57

Grayson_58
(HNH endonuclease)

Grayson_59

Grayson_60

Grayson_61

Grayson_62
(glycosyltransferase)

Grayson_63
(ribonucleotide reductase)

Grayson_64
(ribonucleotide reductase)

Grayson_65

Grayson_66

Grayson_67

Grayson_68
(lysin A)

Grayson_69

Grayson_70

Grayson_71

Grayson_72
(major tail protein)

Grayson_73

Grayson_74

Grayson_75

Grayson_76

Grayson_77
(portal protein)

Grayson_78
(capsid maturation protease)

Grayson_79
(major capsid protein)

Grayson_80

Grayson_81

Grayson_82

Grayson_83
(major tail protein)

Grayson_84

Grayson_85
(tail assembly chaperone)

Grayson_86
(tail assembly chaperone)

Grayson_87
(tape measure protein)

Grayson_88

Grayson_89

Grayson_90
(metallophosphoesterase)

Grayson_91

Grayson_92

Grayson_93

Grayson_94

Grayson_95

Grayson_96

Grayson_97

Grayson_98
(dsDNA helicase)

Grayson_99

Grayson_100
(DNA primase)

Grayson_101
(ssDNA binding protein)

Grayson_102
(DNA polymerase III alpha subunit)

Grayson_103
(DNA polymerase III alpha subunit)

Grayson_104

Grayson_105
(nucleotide pyrophosphohydrolase)

Grayson_106
(RecA-like DNA recombinase)

Grayson_107
(Holliday junction resolvase)

Grayson_108

Grayson_109
(exonuclease)

Grayson_110
(RuvC-like resolvase)

Grayson_111

Grayson_112

Grayson_113

Grayson_114
(terminase large subunit)

Grayson_115
(HNH endonuclease)

Grayson_116

Grayson_117

Grayson_118
(rIIB-like protein)

Grayson_119

Grayson_123

Grayson_124

Grayson_125

Grayson_126

Grayson_127

Grayson_128

Grayson_129

Grayson_130

Grayson_131

Grayson_132

Grayson_133

Grayson_135

Grayson_136

Grayson_141
(band-7-like membrane protein)

Grayson_143

Grayson_144

Grayson_147

Grayson_148

Grayson_149

Grayson_150

Grayson_151

Grayson_152

Grayson_153

Grayson_154
(RNA ligase)

Grayson_155

Grayson_156
(RtcB-like RNA ligase)

Grayson_157

Grayson_160

Grayson_161

Grayson_163

Grayson_164

Grayson_165

Grayson_166

Grayson_167
(metallophosphoesterase)

Grayson_168
(phosphoribosyl pyrophosphate transferase)

Grayson_169
(nicotinate phosphoribosyltransferase)

Grayson_170

Grayson_171

Grayson_172

Grayson_173
(thioredoxin)

Grayson_174
(phosphoesterase)

Grayson_175

Grayson_176

Grayson_177

Grayson_179

Grayson_180

Grayson_181

Grayson_182

Grayson_183

Grayson_184

Grayson_185

Grayson_186

Grayson_187

Grayson_188

Grayson_189

Grayson_190

Grayson_191

Grayson_192

Grayson_193

Grayson_194
(CMP deaminase)

Grayson_195

Grayson_196

Grayson_197

Grayson_198

Grayson_199

Grayson_200

Grayson_201

Grayson_202
(WhiB family transcription factor)

Grayson_203

Grayson_204

Grayson_205

Grayson_206

Grayson_207

Grayson_208

Grayson_209

Grayson_210

Grayson_211

Grayson_212

Grayson_213

Grayson_214

Grayson_215

Grayson_216

Grayson_217
(HNH endonuclease)

Grayson_218

Grayson_219

Grayson_220

Grayson_221

Grayson_222

Grayson_223

Grayson_224
(DNA methyltransferase)

Grayson_225
(DNA methyltransferase)

Grayson_226

Grayson_227

Grayson_228
(phosphatase)

Grayson_229

Grayson_230

Grayson_231

Grayson_232

Grayson_233

Grayson_234

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Grayson_236

Grayson_237

Grayson_238

Grayson_239

Grayson_240

Grayson_241

Grayson_242

Grayson_243

Grayson_244

Grayson_245
(tRNA nucleotidyltransferase)

Grayson_246

Grayson_247

Grayson_248

Grayson_249

Grayson_250

Grayson_251

Grayson_252

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Grayson_254

Grayson_255

Grayson_256

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Grayson_286

Grayson_287

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Grayson_289

Grayson_290

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH153812
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# H6
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload