Gordonia phage Gudmit
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Detailed Information for Phage Gudmit
Discovery Information
Isolation HostGordonia terrae 3612
Found ByShefali Savarirayan
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4 N, 80.0 W Map
Discovery NotesIt was wet and the soil had an almost liquid consistency.
Naming NotesThis is a combination of my sister's and my name (Mitu and Guddu).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 3, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2069
Genome length (bp)42205
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCCCCCGGCG
GC Content65.9%
Sequencing Notes25% of population contains an 81 bp deletion of wt sequence 20721 - 20801 bp
at position 20754 approximately 50% of reads contain a G instead of consensus A
Fasta file available?Yes: Download fasta file
Characterization
ClusterSingleton
Subcluster--
Other Cluster Members
Plaque NotesThis is a small plaque with a miniature halo around it.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload