Arthrobacter phage Huntingdon
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Detailed Information for Phage Huntingdon
Discovery Information
Isolation HostArthrobacter sp. ATCC 21022
Found ByUgo Uguru
Year Found2015
Location FoundHuntingdon Valley, PA United Stated
Finding InstitutionCabrini University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.15848 N, 75.08062 W Map
Discovery NotesHuntingdon was found at Mason Mill park, Huntingdon Valley, PA. It was obtained from a dirty pond with an unpleasant odor. The pond was built to provide habitats for wildlife and to filter pollutant.
Naming NotesHuntingdon is the name of the county where the soil sample was isolated.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1584
Genome length (bp)43891
Character of genome ends3' Sticky Overhang
Overhang Length13 bases
Overhang SequenceGGTAACCGTGATA
GC Content60.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAK
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes61
Has been Phamerated?Yes
Gene List

Click to View

Huntingdon_1

Huntingdon_2

Huntingdon_3

Huntingdon_4

Huntingdon_5
(terminase large subunit)

Huntingdon_6
(portal protein)

Huntingdon_7
(capsid maturation protease)

Huntingdon_8
(major capsid protein)

Huntingdon_9
(capsid decoration protein)

Huntingdon_10

Huntingdon_11
(head-to-tail connector protein)

Huntingdon_12
(head-to-tail connector protein)

Huntingdon_13

Huntingdon_14
(head-to-tail connector protein)

Huntingdon_15
(endo-pectate lyase domain protein)

Huntingdon_16
(tail assembly chaperone)

Huntingdon_17
(tail assembly chaperone)

Huntingdon_18
(tape measure protein)

Huntingdon_19
(minor tail protein)

Huntingdon_20
(minor tail protein)

Huntingdon_21
(minor tail protein)

Huntingdon_22
(minor tail protein)

Huntingdon_23

Huntingdon_24

Huntingdon_25
(endolysin)

Huntingdon_26
(holin)

Huntingdon_27
(helix-turn-helix DNA binding domain protein)

Huntingdon_28

Huntingdon_29
(helicase)

Huntingdon_30
(helix-turn-helix DNA binding domain protein)

Huntingdon_31

Huntingdon_32

Huntingdon_33

Huntingdon_34

Huntingdon_35

Huntingdon_36

Huntingdon_37

Huntingdon_38

Huntingdon_39

Huntingdon_40

Huntingdon_41
(PD-(D/E)XK nuclease)

Huntingdon_42

Huntingdon_43
(RecA-like exonuclease)

Huntingdon_44

Huntingdon_45
(DNA primase/polymerase domain protein)

Huntingdon_46

Huntingdon_47
(DNA polymerase I)

Huntingdon_48
(adenylsuccinate synthetase)

Huntingdon_49

Huntingdon_50

Huntingdon_51

Huntingdon_52
(deoxyuridine triphosphatase)

Huntingdon_53

Huntingdon_54
(helix-turn-helix DNA binding domain protein)

Huntingdon_55

Huntingdon_56
(helix-turn-helix DNA binding domain protein)

Huntingdon_57

Huntingdon_58

Huntingdon_59

Huntingdon_60

Huntingdon_61
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMG210949
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator Cabrini College
SEA Lysate Titer 2.4e9 pfu/ml
Date of SEA Lysate Titering Jun 18, 2015
Pitt Freezer Box# 2
Pitt Freezer Box Grid# F1
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload