Streptomyces phage Izzy
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Detailed Information for Phage Izzy
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByJessi Narvaez and Orooj Syed
Year Found2014
Location FoundSan Antonio, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.590722 N, 98.993167 W Map
Discovery NotesSoil sample was taken from a backyard in San Antonio, TX. The air temperature was approximately 80 degrees F. It was collected on August 31st, 2014. This sample was adopted from Dhanya Prasad.
Naming NotesWe named the phage Izzy because it is Jessi's cat's name and Orooj's favorite character on the TV show Grey's Anatomy.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 9, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1360
Genome length (bp)50113
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGGCAGTGAT
GC Content65.9%
Sequencing NotesThis DNA sample had a 47 bp deletion that was present in about 60% of the reads. The bases from 560 to 606 (inclusive) are the ones deleted.
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Other Cluster Members
Plaque NotesPlaques were approximately 3 mm in diameter. They were irregular circles with halos and were clear.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes74
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKT184390
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload