Microbacterium phage KaiHaiDragon
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Detailed Information for Phage KaiHaiDragon
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found BySteven Tran
Year Found2018
Location FoundRiverside, CA United States
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates33.9099 N, 117.5013 W Map
Discovery NotesThe phage was discovered from a soil sample from La Sierra University behind South Hall. The soil sample was taken approximately 6 feet away from the dumpster and 10 feet away from the fire hydrant. The soil sample was taken from a spot between the plants and the grass where there was a lot of dirt that had accumulated. The temperature was 52 degrees Fahrenheit with light drizzle. The soil sample was taken very near the surface as the roots of the plants and the grass made it difficult to get deep into the soil. The soil sample itself was very cold, moist, and filled with organic matter.
Naming NotesI named the phage KaiHaiDragon as my Chinese middle character is Kai, my father's middle Chinese character is Hai, and my father's last Chinese character means dragon. I wanted my dad to be a part of my phage name as he has been a big reason in me getting to where I am now and it was only right that I choose a name that had a part of both him and me in it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 26, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1039
Genome length (bp)52992
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusAwaiting_QC
Plaque NotesThe plaques were very small, measuring about 0.1 mm in diameter. The phages were clear and were virulent phages as the plaques were clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 72
Pitt Freezer Box Grid# E3
Available Files
Plaque PictureDownload
EM PictureDownload