Microbacterium phage KaiHaiDragon
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Detailed Information for Phage KaiHaiDragon
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found BySteven Tran
Year Found2018
Location FoundRiverside, CA United States
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates33.9099 N, 117.5013 W Map
Discovery NotesThe phage was discovered from a soil sample from La Sierra University behind South Hall. The soil sample was taken approximately 6 feet away from the dumpster and 10 feet away from the fire hydrant. The soil sample was taken from a spot between the plants and the grass where there was a lot of dirt that had accumulated. The temperature was 52 degrees Fahrenheit with light drizzle. The soil sample was taken very near the surface as the roots of the plants and the grass made it difficult to get deep into the soil. The soil sample itself was very cold, moist, and filled with organic matter.
Naming NotesI named the phage KaiHaiDragon as my Chinese middle character is Kai, my father's middle Chinese character is Hai, and my father's last Chinese character means dragon. I wanted my dad to be a part of my phage name as he has been a big reason in me getting to where I am now and it was only right that I choose a name that had a part of both him and me in it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 26, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1039
Genome length (bp)52992
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques were very small, measuring about 0.1 mm in diameter. The phages were clear and were virulent phages as the plaques were clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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KaiHaiDragon_1
(terminase small subunit)

KaiHaiDragon_2

KaiHaiDragon_3
(terminase large subunit)

KaiHaiDragon_4

KaiHaiDragon_5

KaiHaiDragon_6

KaiHaiDragon_7

KaiHaiDragon_8

KaiHaiDragon_9

KaiHaiDragon_10

KaiHaiDragon_11

KaiHaiDragon_12

KaiHaiDragon_13

KaiHaiDragon_14

KaiHaiDragon_15

KaiHaiDragon_16

KaiHaiDragon_17

KaiHaiDragon_18

KaiHaiDragon_19

KaiHaiDragon_20
(portal protein)

KaiHaiDragon_21

KaiHaiDragon_22

KaiHaiDragon_23
(capsid morphogenesis protein)

KaiHaiDragon_24

KaiHaiDragon_25
(capsid maturation protease)

KaiHaiDragon_26

KaiHaiDragon_27
(major capsid protein)

KaiHaiDragon_28

KaiHaiDragon_29

KaiHaiDragon_30
(major tail protein)

KaiHaiDragon_31
(head-to-tail connector complex protein)

KaiHaiDragon_32

KaiHaiDragon_33

KaiHaiDragon_34
(tail assembly chaperone)

KaiHaiDragon_35
(tail assembly chaperone)

KaiHaiDragon_36
(tape measure protein)

KaiHaiDragon_37
(minor tail protein)

KaiHaiDragon_38
(minor tail protein)

KaiHaiDragon_39
(minor tail protein)

KaiHaiDragon_40
(minor tail protein)

KaiHaiDragon_41

KaiHaiDragon_42

KaiHaiDragon_43
(lysin A)

KaiHaiDragon_44
(membrane protein)

KaiHaiDragon_45

KaiHaiDragon_46
(membrane protein)

KaiHaiDragon_47

KaiHaiDragon_48
(exonuclease)

KaiHaiDragon_49
(ERF family ssDNA binding protein)

KaiHaiDragon_50

KaiHaiDragon_51

KaiHaiDragon_52
(helix-turn-helix DNA binding domain protein)

KaiHaiDragon_53

KaiHaiDragon_54
(HNH endonuclease)

KaiHaiDragon_55

KaiHaiDragon_56

KaiHaiDragon_57

KaiHaiDragon_58

KaiHaiDragon_59

KaiHaiDragon_60

KaiHaiDragon_61

KaiHaiDragon_62

KaiHaiDragon_63

KaiHaiDragon_64

KaiHaiDragon_65
(ssDNA-binding protein)

KaiHaiDragon_66

KaiHaiDragon_67
(DNA binding protein)

KaiHaiDragon_68
(helix-turn-helix DNA binding domain protein)

KaiHaiDragon_69

KaiHaiDragon_70

KaiHaiDragon_71

KaiHaiDragon_72

KaiHaiDragon_73

KaiHaiDragon_74

KaiHaiDragon_75

KaiHaiDragon_76

KaiHaiDragon_77

KaiHaiDragon_78

KaiHaiDragon_79

KaiHaiDragon_80

KaiHaiDragon_81

KaiHaiDragon_82

KaiHaiDragon_83
(RNA polymerase sigma factor)

KaiHaiDragon_84
(ParB-like nuclease domain protein)

KaiHaiDragon_85

KaiHaiDragon_86
(glycosyltransferase)

KaiHaiDragon_87
(UDP-glucose dehydrogenase)

KaiHaiDragon_88
(AAA-ATPase)

KaiHaiDragon_89

KaiHaiDragon_90

KaiHaiDragon_91

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH590600
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 72
Pitt Freezer Box Grid# E3
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload