Streptomyces phage Karimac
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Detailed Information for Phage Karimac
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByRichard Hale
Year Found2012
Location FoundFort Worth, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates32.765556 N, 97.478611 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 17, 2014
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage229
Sanger Finishing Reactions5
Genome length (bp)131909
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length12590 bp
End Determination NotesBuildups of reads from Ion Torrent sequencing, flanking a region of double coverage.
GC Content49.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE2
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Karimac_1

Karimac_2

Karimac_3

Karimac_4

Karimac_5

Karimac_6

Karimac_7
(Lsr2-like DNA bridging protein)

Karimac_8

Karimac_9

Karimac_10

Karimac_11

Karimac_12

Karimac_13

Karimac_14

Karimac_15

Karimac_16

Karimac_17

Karimac_18

Karimac_19

Karimac_20

Karimac_21

Karimac_22

Karimac_23

Karimac_24

Karimac_25

Karimac_26

Karimac_27
(HNH endonuclease)

Karimac_28

Karimac_29
(thymidylate synthase)

Karimac_30

Karimac_31

Karimac_32

Karimac_33

Karimac_34

Karimac_35

Karimac_36

Karimac_37

Karimac_39
(HNH endonuclease)

Karimac_40
(hydrolase)

Karimac_41

Karimac_42

Karimac_43
(glycosyltransferase)

Karimac_44
(ribonucleotide reductase)

Karimac_45
(LysM-like endolysin)

Karimac_46

Karimac_47

Karimac_48
(portal protein)

Karimac_49

Karimac_50
(capsid maturation protease)

Karimac_51
(major capsid protein)

Karimac_52

Karimac_53

Karimac_54

Karimac_55

Karimac_56

Karimac_57
(major tail protein)

Karimac_58
(tail assembly chaperone)

Karimac_59

Karimac_60
(tape measure protein)

Karimac_61
(minor tail protein)

Karimac_62
(minor tail protein)

Karimac_63

Karimac_64
(minor tail protein)

Karimac_65
(minor tail protein)

Karimac_66

Karimac_67

Karimac_68

Karimac_69
(HNH endonuclease)

Karimac_70
(metallophosphoesterase)

Karimac_71
(holin)

Karimac_72

Karimac_73

Karimac_74

Karimac_75

Karimac_76

Karimac_77
(DnaB-like dsDNA helicase)

Karimac_78

Karimac_79
(DNA primase)

Karimac_80
(ssDNA-binding protein)

Karimac_81
(DnaE-like DNA polymerase III alpha)

Karimac_82

Karimac_83
(MazG-like nucleotide pyrophosphohydrolase)

Karimac_84
(RecA-like recombinase)

Karimac_85

Karimac_86

Karimac_87

Karimac_88

Karimac_89

Karimac_90
(exonuclease)

Karimac_91

Karimac_92
(RuvC-like resolvase)

Karimac_93

Karimac_94

Karimac_95
(methyltransferase)

Karimac_96
(thymidylate kinase)

Karimac_97

Karimac_98

Karimac_99
(terminase)

Karimac_100
(HNH endonuclease)

Karimac_101

Karimac_105

Karimac_106

Karimac_109
(nucleotidyltransferase)

Karimac_110
(FtsK-like DNA translocase)

Karimac_111

Karimac_113

Karimac_115

Karimac_116

Karimac_118

Karimac_120

Karimac_121

Karimac_122

Karimac_123

Karimac_124

Karimac_126

Karimac_127

Karimac_129

Karimac_130
(Ro-like RNA binding protein)

Karimac_131

Karimac_132

Karimac_133

Karimac_134

Karimac_135

Karimac_136

Karimac_137

Karimac_138

Karimac_139

Karimac_141

Karimac_149

Karimac_150

Karimac_151

Karimac_154
(peptidase)

Karimac_155

Karimac_157

Karimac_158

Karimac_159

Karimac_161
(band-7-like membrane protein)

Karimac_162

Karimac_163

Karimac_165

Karimac_169

Karimac_171

Karimac_173

Karimac_176

Karimac_177

Karimac_178

Karimac_181

Karimac_182

Karimac_183

Karimac_187

Karimac_189

Karimac_190
(exonuclease)

Karimac_191

Karimac_193

Karimac_194

Karimac_195

Karimac_196

Karimac_197

Karimac_199

Karimac_200

Karimac_201

Karimac_202

Karimac_203

Karimac_204
(RNA ligase)

Karimac_205

Karimac_206

Karimac_207

Karimac_208

Karimac_209
(polynucleotide kinase)

Karimac_210

Karimac_211

Karimac_212

Karimac_214

Karimac_215

Karimac_217
(SprT-like protease)

Karimac_218

Karimac_219

Karimac_220

Karimac_222

Karimac_223

Karimac_224

Karimac_225

Karimac_226

Karimac_227

Karimac_228

Karimac_229

Karimac_230

Karimac_231
(deoxycytidylate deaminase)

Karimac_232
(phosphoesterase)

Karimac_233

Karimac_234

Karimac_235
(WhiB family transcription factor)

Karimac_236

Karimac_237

Karimac_238

Karimac_239

Karimac_240

Karimac_241

Karimac_242

Karimac_243

Karimac_244

Karimac_246

Karimac_247

Karimac_248

Karimac_249

Karimac_250

Karimac_251

Karimac_252

Karimac_253
(thioredoxin)

Karimac_254
(glycosylase)

Karimac_255

Karimac_256

Karimac_257

Karimac_258

Karimac_259

Karimac_260

Karimac_261

Karimac_262

Karimac_263

Karimac_264

Karimac_265
(Lsr2-like DNA bridging protein)

Karimac_266

Karimac_267

Karimac_268

Karimac_269

Karimac_270

Karimac_271

Karimac_272

Karimac_273

Karimac_274

Karimac_275

Karimac_276

Karimac_277

Karimac_278

Karimac_279

Karimac_280

Karimac_281

Karimac_282

Karimac_283

Karimac_284

Karimac_285
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH590599
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 70
Pitt Freezer Box Grid# F7
Available Files
GenBank File for PhameratorDownload