| Detailed Information for Phage LRRHood |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Kim Davis |
| Year Found | 2008 |
| Location Found | Santa Cruz, CA USA |
| Finding Institution | University of California, Santa Cruz |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 36.9986 N, 122.0632 W Map |
| Discovery Notes | Taken from moist redwood soil at 3-4 in, at the Redwood forest at UCSC, on a shady south-facing slope |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 23, 2009 |
| Genome length (bp) | 154349 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | C |
| Subcluster | C1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | At low concentrations, plaques are approximately 1.5mm in diameter. At high concentrations, plaques are very, very small. |
| Morphotype | Myoviridae |
| Number of Genes | 227 |
| Number of tRNAs | 30 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | GQ303262 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Designator |
2008 UCSC LRRHood |
| SEA Lysate Titer |
1.64x 10^11 |
| Pitt Freezer Box# |
2 |
| Pitt Freezer Box Grid# |
D2 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| Virtual Digest Picture | Download |
| EM Picture | Download |
