Mycobacterium phage LRRHood
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Detailed Information for Phage LRRHood
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKim Davis
Year Found2008
Location FoundSanta Cruz, CA USA
Finding InstitutionUniversity of California, Santa Cruz
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates36.9986 N, 122.0632 W Map
Discovery NotesTaken from moist redwood soil at 3-4 in, at the Redwood forest at UCSC, on a shady south-facing slope
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 23, 2009
Genome length (bp)154349
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesAt low concentrations, plaques are approximately 1.5mm in diameter. At high concentrations, plaques are very, very small.
MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes227
Number of tRNAs30
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

LRRHood_1

LRRHood_2

LRRHood_3
(NrdC)

LRRHood_4

LRRHood_5

LRRHood_6

LRRHood_7

LRRHood_8

LRRHood_9

LRRHood_10

LRRHood_11

LRRHood_12

LRRHood_13

LRRHood_14

LRRHood_15

LRRHood_16

LRRHood_17

LRRHood_18

LRRHood_19

LRRHood_20

LRRHood_21

LRRHood_22

LRRHood_23

LRRHood_24

LRRHood_25

LRRHood_26

LRRHood_27

LRRHood_28

LRRHood_29

LRRHood_30

LRRHood_31

LRRHood_32

LRRHood_33

LRRHood_34

LRRHood_35

LRRHood_36

LRRHood_37

LRRHood_38

LRRHood_39

LRRHood_40

LRRHood_41

LRRHood_42

LRRHood_43

LRRHood_44
(repressor)

LRRHood_45

LRRHood_46

LRRHood_47

LRRHood_48

LRRHood_49

LRRHood_50

LRRHood_51

LRRHood_52

LRRHood_53

LRRHood_54

LRRHood_55

LRRHood_56

LRRHood_57

LRRHood_58

LRRHood_59
(HTH DNA-binding)

LRRHood_60

LRRHood_61

LRRHood_62

LRRHood_63

LRRHood_64

LRRHood_65

LRRHood_66

LRRHood_67

LRRHood_68

LRRHood_69

LRRHood_70

LRRHood_71

LRRHood_72
(L13e family)

LRRHood_73

LRRHood_74
(Tat)

LRRHood_75

LRRHood_76

LRRHood_77
(ParBc domain)

LRRHood_82

LRRHood_83

LRRHood_84

LRRHood_85

LRRHood_86

LRRHood_87
(ThyX)

LRRHood_88

LRRHood_89

LRRHood_90

LRRHood_91
(LysM domain)

LRRHood_92
(LysM domain)

LRRHood_93

LRRHood_94

LRRHood_95

LRRHood_96

LRRHood_97

LRRHood_98

LRRHood_99

LRRHood_100

LRRHood_101

LRRHood_102

LRRHood_103

LRRHood_104

LRRHood_105

LRRHood_106

LRRHood_107

LRRHood_108
(head decoration protein-like)

LRRHood_109

LRRHood_110

LRRHood_111

LRRHood_112

LRRHood_113
(membrane protein-like)

LRRHood_114

LRRHood_115

LRRHood_116

LRRHood_117

LRRHood_118

LRRHood_119

LRRHood_120

LRRHood_121

LRRHood_122

LRRHood_123

LRRHood_124

LRRHood_125
(PE-PGRS family)

LRRHood_126

LRRHood_127

LRRHood_128

LRRHood_129
(NLP/P60-family domain)

LRRHood_130
(AxeA)

LRRHood_131

LRRHood_132

LRRHood_133
(baseplate J)

LRRHood_134
(HNH endonuclease)

LRRHood_135

LRRHood_136

LRRHood_137

LRRHood_138

LRRHood_139

LRRHood_140

LRRHood_141

LRRHood_142

LRRHood_143

LRRHood_144

LRRHood_145

LRRHood_146

LRRHood_150

LRRHood_151
(peptidyl-tRNA hydrolase)

LRRHood_166

LRRHood_167

LRRHood_180

LRRHood_181
(helicase)

LRRHood_182

LRRHood_183

LRRHood_184

LRRHood_185

LRRHood_186

LRRHood_187

LRRHood_188

LRRHood_189

LRRHood_190

LRRHood_191
(ArgD)

LRRHood_192

LRRHood_193

LRRHood_194

LRRHood_195
(DnaC)

LRRHood_196
(DnaB-like helicase)

LRRHood_197

LRRHood_198
(primase)

LRRHood_199

LRRHood_200
(J-domain)

LRRHood_201

LRRHood_202
(Pol III alpha)

LRRHood_203
(RF1)

LRRHood_204
(RecA)

LRRHood_205

LRRHood_206

LRRHood_207

LRRHood_208
(RusA)

LRRHood_209

LRRHood_210
(ErpB-like)

LRRHood_211

LRRHood_212

LRRHood_213

LRRHood_214

LRRHood_215

LRRHood_218

LRRHood_219

LRRHood_220

LRRHood_221

LRRHood_222

LRRHood_223

LRRHood_224

LRRHood_225
(Ro)

LRRHood_226

LRRHood_227

LRRHood_228

LRRHood_229

LRRHood_230

LRRHood_231

LRRHood_232
(glycosyl-transferase)

LRRHood_233

LRRHood_234

LRRHood_235

LRRHood_236

LRRHood_237

LRRHood_238

LRRHood_239

LRRHood_240

LRRHood_241

LRRHood_242
(LysA)

LRRHood_243

LRRHood_244
(LysB)

LRRHood_245

LRRHood_246

LRRHood_247

LRRHood_248

LRRHood_249

LRRHood_250
(Pnk)

LRRHood_251

LRRHood_252

LRRHood_253
(Ser/Thr kinase)

LRRHood_254

LRRHood_255

LRRHood_256
(PurA)

LRRHood_257

LRRHood_258

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionGQ303262
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload