Mycobacterium phage Liefie
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Detailed Information for Phage Liefie
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesLiefe
Found ByLilli Holst
Year Found2010
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates29.8587 S, 31.0218 E Map
Discovery NotesRelatively dry, broken up plant matter from a worm farm.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 28, 2011
Genome length (bp)41650
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCCCCATGGCAT
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterG
SubclusterG1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes61
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN412593
Refseq NumberNC_023705
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# C6
Available Files
Plaque PictureDownload
EM PictureDownload