Mycobacterium phage LilHazelnut
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Detailed Information for Phage LilHazelnut
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAshley Hazel
Year Found2016
Location FoundDahlonega, GA USA
Finding InstitutionUniversity of North Georgia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates34.527904 N, 83.987719 W Map
Discovery Notes Soil sample was collected from vegetable garden. Soil was dark and relatively dry (minus previous moisture left from watering).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 6, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2384
Genome length (bp)53746
Character of genome ends3' Sticky Overhang
Overhang Length14 bases
Overhang SequenceTAAGCCGCGCGGTA
GC Content67.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterQ
Subcluster--
Other Cluster Members
Plaque NotesPlaques are round and average about .03 cm in size. They are relatively uniform in size and shape throughout.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

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LilHazelnut_1
(Terminase small subunit)

LilHazelnut_2

LilHazelnut_3

LilHazelnut_4

LilHazelnut_5
(Terminase, large subunit)

LilHazelnut_6
(Portal protein)

LilHazelnut_7
(Capsid maturation protease)

LilHazelnut_8
(Scaffolding protein)

LilHazelnut_9
(Major capsid protein)

LilHazelnut_10

LilHazelnut_11
(Head-tail connector protein)

LilHazelnut_12
(Head-tail connector protein)

LilHazelnut_13

LilHazelnut_14

LilHazelnut_15

LilHazelnut_16

LilHazelnut_17
(Tail assembly chaperone)

LilHazelnut_18

LilHazelnut_19

LilHazelnut_20
(Tape measure protein)

LilHazelnut_21
(Minor tail protein)

LilHazelnut_22
(Minor tail protein)

LilHazelnut_23
(Minor tail protein)

LilHazelnut_24
(Minor tail protein)

LilHazelnut_25
(Minor tail protein)

LilHazelnut_26

LilHazelnut_27
(Minor tail protein)

LilHazelnut_28

LilHazelnut_29
(Integrase, (Y-int))

LilHazelnut_30
(Excise protein)

LilHazelnut_31

LilHazelnut_32
(Lysin A)

LilHazelnut_33
(Lysin B)

LilHazelnut_34
(Holin)

LilHazelnut_35

LilHazelnut_36

LilHazelnut_37
(Minor tail protein)

LilHazelnut_38

LilHazelnut_39

LilHazelnut_40

LilHazelnut_41
(HTH DNA binding domain)

LilHazelnut_42

LilHazelnut_43

LilHazelnut_44

LilHazelnut_45

LilHazelnut_46

LilHazelnut_47

LilHazelnut_48

LilHazelnut_49

LilHazelnut_50
(CRO)

LilHazelnut_51
(Zn-finger DNA binding domain)

LilHazelnut_52

LilHazelnut_53
(HTH DNA binding domain)

LilHazelnut_54

LilHazelnut_55
(RecE exonuclease)

LilHazelnut_56
(RecT ssDNA binding protein)

LilHazelnut_57

LilHazelnut_58

LilHazelnut_59

LilHazelnut_60

LilHazelnut_61

LilHazelnut_62

LilHazelnut_63

LilHazelnut_64
(DnaQ-like exonuclease)

LilHazelnut_65

LilHazelnut_66

LilHazelnut_67
(DNA methyltransferase)

LilHazelnut_68

LilHazelnut_69

LilHazelnut_70

LilHazelnut_71
(DNA Methytransferase)

LilHazelnut_72

LilHazelnut_73

LilHazelnut_74
(Resolvase, RuvC-like)

LilHazelnut_75
(WhiB family transcription factor)

LilHazelnut_76
(HTH DNA-binding)

LilHazelnut_77

LilHazelnut_78

LilHazelnut_79

LilHazelnut_80

LilHazelnut_81

LilHazelnut_82

LilHazelnut_83
(HNH endonuclease)

LilHazelnut_84

LilHazelnut_85

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload