Mycobacterium phage LinStu
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage LinStu
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLindo
Year Found2008
Location Found S. Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates29.8587 S, 31.0218 E Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 29, 2011
Sequencing FacilityPittsburgh Bacteriophage Institute
Genome length (bp)153882
Character of genome endsCircularly Permuted
GC Content64.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

Click to View

Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

MorphotypeMyoviridae
Final annotation complete?Yes
Number of Genes263
Number of tRNAs30
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

LinStu_1

LinStu_2

LinStu_3
(NrdC; NrdC + intein)

LinStu_4

LinStu_5

LinStu_6

LinStu_7

LinStu_8

LinStu_9
(band 7 protein)

LinStu_10

LinStu_11

LinStu_12

LinStu_13

LinStu_14

LinStu_15

LinStu_16

LinStu_17

LinStu_18

LinStu_19

LinStu_20

LinStu_21

LinStu_22

LinStu_23

LinStu_24

LinStu_25

LinStu_26

LinStu_27

LinStu_28

LinStu_29

LinStu_30

LinStu_31

LinStu_32

LinStu_33

LinStu_34

LinStu_35

LinStu_36

LinStu_37

LinStu_38

LinStu_39

LinStu_40

LinStu_41

LinStu_42

LinStu_43

LinStu_44

LinStu_45

LinStu_46

LinStu_47

LinStu_48

LinStu_49

LinStu_50

LinStu_51

LinStu_52

LinStu_53

LinStu_54

LinStu_55

LinStu_56

LinStu_57

LinStu_58

LinStu_59

LinStu_60

LinStu_61

LinStu_62

LinStu_63
(HNH domain)

LinStu_64

LinStu_65

LinStu_66

LinStu_67

LinStu_68

LinStu_69

LinStu_70

LinStu_71

LinStu_72

LinStu_73

LinStu_74

LinStu_75

LinStu_76

LinStu_77
(L13E family domain)

LinStu_78

LinStu_79
(TatC)

LinStu_80

LinStu_81

LinStu_82
(ParBc)

LinStu_88

LinStu_89

LinStu_90

LinStu_91

LinStu_92

LinStu_93
(ThyX)

LinStu_94

LinStu_95

LinStu_96
(LysM domain)

LinStu_97

LinStu_98

LinStu_99

LinStu_100

LinStu_101

LinStu_102

LinStu_103

LinStu_104

LinStu_105

LinStu_106

LinStu_107

LinStu_108

LinStu_109

LinStu_110

LinStu_111

LinStu_112

LinStu_113
(head decoration)

LinStu_114

LinStu_115

LinStu_116

LinStu_117

LinStu_118

LinStu_119

LinStu_120

LinStu_121

LinStu_122

LinStu_123

LinStu_124

LinStu_125

LinStu_126

LinStu_127

LinStu_128
(tail assembly chaperone)

LinStu_129
(tail assembly chaperone)

LinStu_130
(tapemeasure)

LinStu_131

LinStu_132

LinStu_133

LinStu_134
(NLP/P60 domain)

LinStu_135

LinStu_136

LinStu_137

LinStu_138
(baseplate J)

LinStu_139

LinStu_140

LinStu_141

LinStu_142

LinStu_143

LinStu_144

LinStu_145

LinStu_146

LinStu_147

LinStu_148

LinStu_149

LinStu_150

LinStu_154

LinStu_155
(peptidyl-tRNA hydrolase domain)

LinStu_169

LinStu_171

LinStu_172

LinStu_185

LinStu_186
(helicase)

LinStu_187

LinStu_188

LinStu_189

LinStu_190

LinStu_191

LinStu_192

LinStu_193

LinStu_194

LinStu_195

LinStu_196

LinStu_197
(ArgD)

LinStu_198

LinStu_199

LinStu_200

LinStu_201
(DnaC)

LinStu_202
(DnaB-like helicase)

LinStu_203

LinStu_204
(primase)

LinStu_205

LinStu_206
(J-domain)

LinStu_207

LinStu_208
(Pol III alpha)

LinStu_209
(RF-1 domain)

LinStu_210
(RecA)

LinStu_211

LinStu_212

LinStu_213
(terminase)

LinStu_214
(RusA)

LinStu_215

LinStu_216

LinStu_217

LinStu_218

LinStu_219

LinStu_220

LinStu_221

LinStu_224

LinStu_225

LinStu_226

LinStu_227

LinStu_228

LinStu_229

LinStu_230

LinStu_231
(Ro)

LinStu_232

LinStu_233

LinStu_234

LinStu_235

LinStu_236

LinStu_237
(glycosyl transferase)

LinStu_238

LinStu_239

LinStu_240
(galactosyl transferase)

LinStu_241
(spread protein)

LinStu_242
(glycosyl transferase)

LinStu_243
(head decoration)

LinStu_244

LinStu_245

LinStu_246

LinStu_247
(LysA)

LinStu_248

LinStu_249
(LysB)

LinStu_250

LinStu_251

LinStu_252

LinStu_253

LinStu_254

LinStu_255
(Pnk)

LinStu_256

LinStu_257
(Ser/Thr kinase)

LinStu_258

LinStu_259

LinStu_260
(PurA)

LinStu_261

LinStu_262

LinStu_263
(coding region disrupted due to circularly permuted genome)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN412592
Refseq NumberNC_023714
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
EM PictureDownload