Mycobacterium phage Lucky2013
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Detailed Information for Phage Lucky2013
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByWest MIfflin High School Students
Year Found2012
Location FoundWest Mifflin, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.381647N, 79.873422 W Map
Discovery NotesA student from West Mifflin Area High School found the phage.
Naming NotesThe student decided to name the phage in honor of their graduating class (2013).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 14, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage599
Sanger Finishing Reactions9
Genome length (bp)108627
Character of genome ends3' Sticky Overhang
Overhang Length4 bp
Overhang SequenceATCC
GC Content61.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes237
Number of tRNAs2
Has been Phamerated?Yes
Gene List

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Lucky2013_1
(HNH endonuclease)

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(enoyl-CoA hydratase)

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(terminase, large subunit)

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(portal)

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(capsid maturation protease)

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(major capsid)

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(glycosyltransferase domain)

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(serine/threoine kinase)

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(glycoasyl transferase)

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(glycoasyl transferase)

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(glycoasyl transferase)

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(major tail)

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(tail assembly chaperone)

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(tail assembly chaperone)

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(tapemeasure)

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(minor tail)

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(minor tail)

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(minor tail)

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(minor tail)

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(minor tail)

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(minor tail)

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(NHN endonuclease)

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(lysin A)

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(lysin B)

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(membrane protein)

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(NrdH glutaredoxin)

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(lsr2-like)

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(HTH DNA binding domain)

Lucky2013_84
(integrase (Y-Int))

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(HTH DNA binding domain)

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(lipase, LipC-like)

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(AddA-like domain)

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(DNA methylase)

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(polynucleotide kinase)

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Lucky2013_123
(Endo VII)

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(WhiB)

Lucky2013_125
(HTH DNA binding domain)

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Lucky2013_130
(DNA primase/polymerase)

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Lucky2013_136
(HTH DNA binding domain)

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Lucky2013_140
(DnaB-like helicase)

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Lucky2013_148
(RNA ligase)

Lucky2013_149
(Clp protease)

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(DnaQ-like protein)

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Lucky2013_158
(PAPS reductase)

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(MazG-like)

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Lucky2013_196
(FtsK)

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(DNA binding domain Ku protein)

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Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF133445
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload