| Detailed Information for Phage Mahdia | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Nadia Mezghani |
| Year Found | 2015 |
| Location Found | PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.444800 N, 79.952700 W Map |
| Naming Notes | Named after a beach town in Tunisia where I spent many of my summers as a child. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 6, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 3061 |
| Genome length (bp) | 42475 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCCGCCGGTTA |
| GC Content | 67.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CD |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 61 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewMahdia_1 Mahdia_2 Mahdia_3 Mahdia_4 Mahdia_5 Mahdia_6 Mahdia_7 Mahdia_8 Mahdia_9 Mahdia_10 Mahdia_11 Mahdia_12 Mahdia_13 Mahdia_14 Mahdia_15 Mahdia_16 Mahdia_17 Mahdia_18 Mahdia_19 Mahdia_20 Mahdia_21 Mahdia_22 Mahdia_23 Mahdia_24 Mahdia_25 Mahdia_26 Mahdia_27 Mahdia_28 Mahdia_29 Mahdia_30 Mahdia_31 Mahdia_32 Mahdia_33 Mahdia_34 Mahdia_35 Mahdia_36 Mahdia_37 Mahdia_38 Mahdia_39 Mahdia_40 Mahdia_41 Mahdia_42 Mahdia_43 Mahdia_44 Mahdia_45 Mahdia_46 Mahdia_47 Mahdia_48 Mahdia_49 Mahdia_50 Mahdia_51 Mahdia_52 Mahdia_53 Mahdia_54 Mahdia_55 Mahdia_56 Mahdia_57 Mahdia_58 Mahdia_59 Mahdia_60 Mahdia_61 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MG198783 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 4 |
| Pitt Freezer Box Grid# | H1 |
| Available Files | |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |