Streptomyces phage Maneekul
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Detailed Information for Phage Maneekul
Discovery Information
Isolation HostStreptomyces xanthochromogenes NRRL B-5410
Found ByJindanuch Maneekul
Year Found2016
Location FoundDenton, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates33.212624 N, 97.146247 W Map
Discovery NotesSoil was collected on 9/12/16 at 8:02 am. It was moist soil, fine, and brown. The temperature was 23 degree Celsius with 91% humidity.
Naming NotesI named the discovered phage after my family name.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 7, 2017
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage150
Genome length (bp)51612
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCGGCCAGTGAT
GC Content65.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBD
SubclusterBD1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe average diameter is 3 mm. They are all circular. The plaques are also clear.
MorphotypeSiphoviridae
Number of Genes71
Has been Phamerated?Yes
Gene List

Click to View

Maneekul_1

Maneekul_2
(HNH endonuclease)

Maneekul_3

Maneekul_4
(thioredoxin)

Maneekul_5
(terminase small subunit)

Maneekul_6
(terminase large subunit)

Maneekul_7
(portal protein)

Maneekul_8

Maneekul_9
(scaffolding protein)

Maneekul_10
(major capsid protein)

Maneekul_11
(head-to-tail connector complex protein)

Maneekul_12
(head-to-tail connector complex protein)

Maneekul_13

Maneekul_14

Maneekul_15
(major tail protein)

Maneekul_16
(tail assembly chaperone)

Maneekul_17
(tail assembly chaperone)

Maneekul_18
(tape measure protein)

Maneekul_19
(minor tail protein)

Maneekul_20
(minor tail protein)

Maneekul_21

Maneekul_22

Maneekul_23

Maneekul_24

Maneekul_25
(LysM-like endolysin)

Maneekul_26

Maneekul_27

Maneekul_28
(immunity repressor)

Maneekul_29

Maneekul_30
(exonuclease)

Maneekul_31

Maneekul_32

Maneekul_33

Maneekul_34
(deoxycytidylate deaminase)

Maneekul_35
(dsDNA helicase)

Maneekul_36
(holliday junction resolvase)

Maneekul_37

Maneekul_38
(DNA primase)

Maneekul_39
(DNA primase)

Maneekul_40

Maneekul_41

Maneekul_42

Maneekul_43
(endonuclease)

Maneekul_44

Maneekul_45
(helix-turn-helix DNA binding domain protein)

Maneekul_46

Maneekul_47
(ribonucleotide reductase)

Maneekul_48
(DNA methylase)

Maneekul_49

Maneekul_50
(integrase)

Maneekul_51
(ThyX thymidylate synthase)

Maneekul_52

Maneekul_53

Maneekul_54
(DNA polymerase III alpha subunit)

Maneekul_55

Maneekul_56

Maneekul_57

Maneekul_58
(deoxynucleoside monophosphate kinase)

Maneekul_59

Maneekul_60

Maneekul_61

Maneekul_62

Maneekul_63

Maneekul_64

Maneekul_65
(HNH endonuclease)

Maneekul_66

Maneekul_67

Maneekul_68

Maneekul_69

Maneekul_70

Maneekul_71

Maneekul_72

Maneekul_73

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH171095
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.6x10^9 pfu/ml
Date of SEA Lysate Titering Nov 10, 2016
Pitt Freezer Box# 36
Pitt Freezer Box Grid# F8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload