Mycobacterium phage MooMoo
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Detailed Information for Phage MooMoo
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCole Blair
Year Found2011
Location FoundSandy Hook, KY USA
Finding InstitutionWestern Kentucky University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.076844 N, 83.183492 W Map
Discovery NotesThe sample came from a creek at approximately sixty degrees fahrenheit.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 30, 2012
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage400
Sanger Finishing Reactions5
Genome length (bp)55178
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCCCGCCTGA
GC Content62.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterSingleton
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesThe plaques form a sort of "halo" ring around their darker centers. They grow close together and towards each other, but the rings of each never touch each other. They were about 5mm in diameter.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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MooMoo_1

MooMoo_2
(terminase large subunit)

MooMoo_3
(portal protein)

MooMoo_4
(capsid maturation protease)

MooMoo_5
(major capsid protein)

MooMoo_6

MooMoo_7
(head-to-tail connector complex protein)

MooMoo_8

MooMoo_9

MooMoo_10
(head-to-tail connector complex protein)

MooMoo_11
(major tail protein)

MooMoo_12
(tail assembly chaperone)

MooMoo_13
(tail assembly chaperone)

MooMoo_14
(tape measure protein)

MooMoo_15
(minor tail protein)

MooMoo_16
(minor tail protein)

MooMoo_17
(minor tail protein)

MooMoo_18
(minor tail protein)

MooMoo_19
(minor tail protein)

MooMoo_20
(minor tail protein)

MooMoo_21
(minor tail protein)

MooMoo_22
(helix-turn-helix DNA binding domain protein)

MooMoo_23

MooMoo_24

MooMoo_25

MooMoo_26

MooMoo_27

MooMoo_28
(lysin A)

MooMoo_29
(lysin B)

MooMoo_30
(holin)

MooMoo_31
(membrane protein)

MooMoo_32

MooMoo_33
(holin)

MooMoo_34

MooMoo_35

MooMoo_36

MooMoo_37
(helix-turn-helix DNA binding protein)

MooMoo_38

MooMoo_39
(membrane protein)

MooMoo_40

MooMoo_41
(integrase)

MooMoo_42

MooMoo_43
(XRE family like HTH DNA binding protein)

MooMoo_44
(antirepressor)

MooMoo_45

MooMoo_46
(excisionase)

MooMoo_47

MooMoo_48

MooMoo_49

MooMoo_50

MooMoo_51

MooMoo_52

MooMoo_53

MooMoo_54

MooMoo_55

MooMoo_56

MooMoo_57

MooMoo_58
(WhiB family transcription factor)

MooMoo_59

MooMoo_60

MooMoo_61

MooMoo_62

MooMoo_63
(DNA recombinase)

MooMoo_64

MooMoo_65
(DNA methylase)

MooMoo_66
(HNH endonuclease)

MooMoo_67
(helix-turn-helix DNA binding protein)

MooMoo_68

MooMoo_69

MooMoo_70

MooMoo_71

MooMoo_72

MooMoo_73

MooMoo_74

MooMoo_75

MooMoo_76

MooMoo_77

MooMoo_78

MooMoo_79

MooMoo_80

MooMoo_81

MooMoo_82

MooMoo_83

MooMoo_84

MooMoo_85

MooMoo_86

MooMoo_87

MooMoo_88

MooMoo_89

MooMoo_90

MooMoo_91

MooMoo_92

MooMoo_93

MooMoo_94
(glycosyltransferase)

MooMoo_95
(serine/threonine kinase)

MooMoo_96
(N-acetylglucosaminyl transferase)

MooMoo_97
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH001449
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator 2011WEKUMooMooBCB
SEA Lysate Titer 4.4e12
Date of SEA Lysate Titering Oct 11, 2011
Pitt Freezer Box# 31
Pitt Freezer Box Grid# 12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload