Microbacterium phage Nagem
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Detailed Information for Phage Nagem
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByMegan Ulbrich
Year Found2017
Location FoundPIttsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.447222 N, 79.954167 W Map
Discovery NotesNagem was isolated from a extremely fine and dry soil sample collected in the Pittsburgh area.
Naming NotesNagem is just my name spelled backwards. At the time of isolation, I was tasked with naming over 30 other phages and at one point, I just ran out of ideas.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 9, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1792
Genome length (bp)41846
Character of genome endsCircularly Permuted
GC Content63.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEA
SubclusterEA1
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesNagem plaques are clear and range in size from 1mm to ~4mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH045560
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload