Gordonia phage Nordenberg
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Detailed Information for Phage Nordenberg
Discovery Information
Isolation HostGordonia terrae 3612
Found ByDaniel Velasco
Year Found2016
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4437 N, 79.9561 W Map
Discovery NotesThe soil sample was collected on February 2nd at 7:55 P.M. It was 44 degrees Fahrenheit at the moment of collection. In the past 24 hours of the collection, the temperature was fairly warm. It was a high of 59 degrees fahrenheit. Since the soil was collected at nighttime, the soil was soft and little cold. However, the warm temperature from the day allowed for the soil to become softer.
Naming NotesThe name for this phage came from the fact that the soil was collected right outside a building called Nordenberg Hall. I do not live in the building, but the interior of it is extremely nice and part of me wishes that I was living in it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 5, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3348
Genome length (bp)57572
Character of genome endsCircularly Permuted
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDE
Subcluster--
Other Cluster Members
Plaque NotesTurbid plaques.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload