Mycobacterium phage OctaviousRex
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Detailed Information for Phage OctaviousRex
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJared Whitford
Year Found2016
Location FoundNewburgh, NY United States
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates41.51 N, 74.01 W Map
Discovery NotesI walked around my college's campus and decided to gather samples from a two different flower beds, and i gathered a sample from under a tree.
Naming NotesI named my phage Octavious Rex because its a character from Spongebob and Spongebob is funny
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 1, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3050
Genome length (bp)41880
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCCCCATGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterG
SubclusterG1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

OctaviousRex_1
(terminase small subunit)

OctaviousRex_2
(terminase large subunit)

OctaviousRex_3
(portal protein)

OctaviousRex_4
(capsid maturation protease)

OctaviousRex_5

OctaviousRex_6
(scaffolding protein)

OctaviousRex_7
(major capsid protein)

OctaviousRex_8

OctaviousRex_9
(head-to-tail connector complex protein)

OctaviousRex_10
(head-to-tail connector complex protein)

OctaviousRex_11

OctaviousRex_12
(head-to-tail connector complex protein)

OctaviousRex_13
(major tail protein)

OctaviousRex_14
(tail assembly chaperone)

OctaviousRex_15
(tail assembly chaperone)

OctaviousRex_16
(tape measure protein)

OctaviousRex_17
(minor tail protein)

OctaviousRex_18
(minor tail protein)

OctaviousRex_19
(minor tail protein)

OctaviousRex_20
(minor tail protein)

OctaviousRex_21
(minor tail protein)

OctaviousRex_22
(minor tail protein)

OctaviousRex_23

OctaviousRex_24

OctaviousRex_25

OctaviousRex_26

OctaviousRex_27
(lysin A)

OctaviousRex_28
(lysin B)

OctaviousRex_29
(holin)

OctaviousRex_30

OctaviousRex_31

OctaviousRex_32
(integrase)

OctaviousRex_33
(immunity repressor)

OctaviousRex_34
(recombination directionality factor)

OctaviousRex_35

OctaviousRex_36

OctaviousRex_37

OctaviousRex_38

OctaviousRex_39

OctaviousRex_40

OctaviousRex_41

OctaviousRex_42
(RecE-like exonuclease)

OctaviousRex_43
(RecT-like ssDNA binding protein)

OctaviousRex_44

OctaviousRex_45

OctaviousRex_46

OctaviousRex_47

OctaviousRex_48

OctaviousRex_49

OctaviousRex_50
(RuvC-like resolvase)

OctaviousRex_51

OctaviousRex_52

OctaviousRex_53

OctaviousRex_54

OctaviousRex_55

OctaviousRex_56

OctaviousRex_57
(MPME 1 protein)

OctaviousRex_58

OctaviousRex_59

OctaviousRex_60

OctaviousRex_61
(HNH endonuclease)

OctaviousRex_62

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH371119
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 35
Pitt Freezer Box Grid# F2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload