Detailed Information for Phage P106I |
Discovery Information |
Isolation Host | Propionibacterium acnes ATCC 29399 |
Found By | Laura Marinelli |
Year Found | 2011 |
Location Found | Los Angeles, CA USA |
Finding Institution | University of California, Los Angeles |
Program | Unavailable |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 34.0689 N, 118.4452 W Map |
Discovery Notes | Was originally 3 phages; P106F (isolated on 11827), P106I (isolated on 29399), and P106K (isolated on 6921), but they were identical on all strains tested, so we only sequenced P106I |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 2, 2016 |
Sequencing Facility | The UCLA Genotyping and Sequencing Core |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 6540 |
Genome length (bp) | 29470 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | TCGTACGGCTT |
GC Content | 54.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BU |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Small clear plaques on 6919 and 11827 and medium/large clear plaques on 6921 and 29399 |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN813688 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Ignore |
Available Files |
GenBank File for Phamerator | Download |