The Actinobacteriophage Database

Streptomyces phage Paradiddles

Add or modify phage thumbnail images to appear at the top of this page.

Know something about this phage that we don't? Modify its data.

Detailed Information for Phage Paradiddles
Discovery Information
Isolation Host	Streptomyces griseus ATCC 10137
Found By	Canyon Calovich-Benne
Year Found	2016
Location Found	Denton, TX USA
Finding Institution	University of North Texas
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	33.213968 N, 97.148256 W Map
Discovery Notes	The soil collected was approximately 3:30 P.M., Sunny, 32.2 degrees C., near a large unknown type of tree, packed under woodchips, the soil was dark in color almost black.
Naming Notes	Paradiddles are a drum rudiment. My favorite hobby outside of school is drumming.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Dec 14, 2016
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	1000
Genome length (bp)	133486
Character of genome ends	Direct Terminal Repeat
Direct Terminal Repeat Length	10778 bp
GC Content	49.5%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	BE
Subcluster	BE1
Cluster Life Cycle	Lytic
Lysogeny Notes	Lysogen Negative
Other Cluster Members	Click to View Anedea (BE1) Angela (BE1) Bartholomune (BE1) BlueOtter (BE1) Bmoc (BE1) Braelyn (BE1) Cross (BE1) Cursive (BE1) Daubenski (BE1) EGole (BE1) Evy (BE1) HangryHippo (BE1) Jay2Jay (BE1) Larnav (BE1) Leo04 (BE1) Liandry (BE1) LilMartin (BE1) Lululemon (BE1) Mildred21 (BE1) MulchMansion (BE1) Navo (BE1) NootNoot (BE1) PacManQ (BE1) Paradiddles (BE1) Peebs (BE1) Pepperwood (BE1) Persimmon (BE1) PinkiePie (BE1) Samisti12 (BE1) Squillium (BE1) Sushi23 (BE1) Targaryen (BE1) Teutsch (BE1) Tribute (BE1) Warpy (BE1) Watermoore (BE1) WhereRU (BE1) Amabiko (BE2) Battuta (BE2) Birchlyn (BE2) BoomerJR (BE2) Bordeaux (BE2) CeilingFan (BE2) Elmer (BE2) Enygma (BE2) Genie2 (BE2) Gibbi (BE2) IchabodCrane (BE2) JimJam (BE2) Jollison (BE2) Karimac (BE2) KentuckyRacer (BE2) LukeCage (BE2) MindFlayer (BE2) Mugiwara (BE2) PumpkinSpice (BE2) Quaran19 (BE2) SaltySpitoon (BE2) Sollertia (BE2) Spelly (BE2) Spilled (BE2) Stanimal (BE2) Starbow (BE2) StarPlatinum (BE2) Tomas (BE2) TomSawyer (BE2) Wipeout (BE2) Wofford (BE2) Yaboi (BE2)
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Average size of plaques were 1mm. clear when on plate.
Morphotype	Siphoviridae
Number of Genes	216
Number of tRNAs	46
Number of tmRNAs	1
Has been Phamerated?	Yes
Gene List	Click to View Paradiddles_1 Paradiddles_2 Paradiddles_3 Paradiddles_4 Paradiddles_5 Paradiddles_6 Paradiddles_7 (Lsr2-like DNA bridging protein) Paradiddles_8 Paradiddles_9 Paradiddles_10 (ParB-like nuclease domain protein) Paradiddles_11 Paradiddles_12 Paradiddles_13 Paradiddles_14 Paradiddles_15 Paradiddles_16 Paradiddles_17 Paradiddles_18 Paradiddles_19 Paradiddles_20 Paradiddles_21 Paradiddles_22 (HNH endonuclease) Paradiddles_23 Paradiddles_24 (ThyX-like thymidylate synthase) Paradiddles_25 Paradiddles_26 Paradiddles_27 Paradiddles_28 Paradiddles_29 Paradiddles_30 Paradiddles_31 Paradiddles_33 (HNH endonuclease) Paradiddles_34 (endolysin) Paradiddles_35 Paradiddles_36 Paradiddles_37 (glycosyltransferase) Paradiddles_38 (ribonucleotide reductase) Paradiddles_39 (HNH endonuclease) Paradiddles_40 (LysM-like peptidoglycan-binding protein) Paradiddles_41 Paradiddles_42 Paradiddles_43 (portal protein) Paradiddles_44 Paradiddles_45 (capsid maturation protease) Paradiddles_46 (major capsid protein) Paradiddles_47 Paradiddles_48 Paradiddles_49 Paradiddles_50 Paradiddles_51 Paradiddles_52 Paradiddles_53 Paradiddles_54 Paradiddles_55 (tape measure protein) Paradiddles_56 Paradiddles_57 (minor tail protein) Paradiddles_58 Paradiddles_59 (minor tail protein) Paradiddles_60 (minor tail protein) Paradiddles_61 Paradiddles_62 Paradiddles_63 Paradiddles_64 (HNH endonuclease) Paradiddles_65 (metallophosphoesterase) Paradiddles_66 Paradiddles_67 Paradiddles_68 Paradiddles_69 Paradiddles_70 Paradiddles_71 Paradiddles_72 (DNA helicase) Paradiddles_73 (DNA primase) Paradiddles_74 Paradiddles_75 (DnaE-like DNA polymerase III alpha) Paradiddles_76 Paradiddles_77 (MazG-like nucleotide pyrophosphohydrolase) Paradiddles_78 (RecA-like DNA recombinase) Paradiddles_79 Paradiddles_80 (holliday junction resolvase) Paradiddles_81 Paradiddles_82 Paradiddles_83 (Cas4 family exonuclease) Paradiddles_84 Paradiddles_85 (RuvC-like resolvase) Paradiddles_86 (DprA-like ssDNA binding protein) Paradiddles_87 Paradiddles_88 (methyltransferase) Paradiddles_89 (thymidylate kinase) Paradiddles_90 Paradiddles_91 Paradiddles_92 (terminase) Paradiddles_93 (HNH endonuclease) Paradiddles_94 Paradiddles_95 Paradiddles_99 Paradiddles_102 (nucleotidyltransferase) Paradiddles_103 (FtsK-like DNA translocase) Paradiddles_104 Paradiddles_106 Paradiddles_107 Paradiddles_109 Paradiddles_111 Paradiddles_112 Paradiddles_113 (hydrolase) Paradiddles_115 Paradiddles_118 Paradiddles_119 Paradiddles_120 (Ro-like RNA binding protein) Paradiddles_121 Paradiddles_122 Paradiddles_123 Paradiddles_124 Paradiddles_125 Paradiddles_126 Paradiddles_127 Paradiddles_129 Paradiddles_131 Paradiddles_137 Paradiddles_138 Paradiddles_139 Paradiddles_142 Paradiddles_143 Paradiddles_145 Paradiddles_146 Paradiddles_148 (band-7-like membrane protein) Paradiddles_149 Paradiddles_150 Paradiddles_157 Paradiddles_160 Paradiddles_166 Paradiddles_167 Paradiddles_170 (HNH endonuclease) Paradiddles_173 Paradiddles_174 (DnaQ-like DNA polymerase III subunit) Paradiddles_176 (hydrolase) Paradiddles_177 Paradiddles_178 Paradiddles_179 Paradiddles_180 Paradiddles_182 Paradiddles_183 Paradiddles_184 Paradiddles_185 Paradiddles_186 (RNA ligase) Paradiddles_187 Paradiddles_188 Paradiddles_189 Paradiddles_190 (polynucleotide kinase) Paradiddles_191 Paradiddles_193 Paradiddles_194 Paradiddles_196 Paradiddles_197 Paradiddles_200 Paradiddles_201 Paradiddles_202 Paradiddles_203 Paradiddles_204 Paradiddles_205 Paradiddles_206 Paradiddles_207 Paradiddles_208 Paradiddles_209 (deoxycytidylate deaminase) Paradiddles_210 Paradiddles_211 (rIIB-like protein) Paradiddles_212 (phosphoesterase) Paradiddles_213 Paradiddles_214 Paradiddles_215 (WhiB family transcription factor) Paradiddles_216 Paradiddles_217 Paradiddles_218 Paradiddles_219 Paradiddles_220 Paradiddles_221 Paradiddles_222 Paradiddles_223 Paradiddles_225 Paradiddles_226 Paradiddles_227 Paradiddles_228 Paradiddles_229 Paradiddles_230 Paradiddles_231 (thioredoxin) Paradiddles_232 Paradiddles_233 Paradiddles_234 Paradiddles_235 Paradiddles_236 Paradiddles_237 Paradiddles_238 Paradiddles_239 Paradiddles_240 Paradiddles_241 Paradiddles_242 Paradiddles_243 Paradiddles_244 Paradiddles_245 Paradiddles_246 Paradiddles_247 Paradiddles_248 (Lsr2-like DNA bridging protein) Paradiddles_249 Paradiddles_250 Paradiddles_251 (ParB-like nuclease domain protein) Paradiddles_252 Paradiddles_253 Paradiddles_254 Paradiddles_255 Paradiddles_256 Paradiddles_257 Paradiddles_258 Paradiddles_259 Paradiddles_260 Paradiddles_261 Paradiddles_262 Paradiddles_263 (HNH endonuclease)
Submitted Minimal DNA Master File	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MF347637
Refseq Number	None yet
Archiving Info
Archiving status	Archived
SEA Lysate Titer	4x10^9 pfu/mL
Pitt Freezer Box#	36
Pitt Freezer Box Grid#	G8
Available Files
Restriction Digest Picture	Download
EM Picture	Download
GenBank File for Phamerator	Download

Click to View

Click to View