Mycobacterium phage Patter
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Detailed Information for Phage Patter
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJenna Kwiecinski
Year Found2016
Location FoundPhiladelphia, PA United States
Finding InstitutionUniversity of the Sciences in Philadelphia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates39.94472 N, 75.20778 W Map
Discovery NotesSample was collected on September 15, 2016, from the A level soil horizon. It was collected from a rain purification area at University of the Sciences. Type of soil was sandy loam according to a ribbon test. Weather was 80 degrees Fahrenheit with cloudless skies and no wind.
Naming NotesThe name Patter came from the "pitter-patter" sound that rain makes. My phage was collected from a rain purification area, so I wanted its name to relate to rain/water.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage591
Genome length (bp)155470
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Breeniome (C1)

Bxz1 (C1)

Cali (C1)

Catera (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Delilah (C1)

Derek (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

FoxtrotP1 (C1)

FrayBell (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phox (C1)

Pier (C1)

Pio (C1)

Pleione (C1)

QBert (C1)

Rizal (C1)

Roots515 (C1)

SandySandal (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Plaque NotesPlaques were 1 mm in diameter and lytic.
MorphotypeMyoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

Click to View

Patter_1

Patter_2

Patter_3

Patter_4

Patter_5

Patter_6

Patter_7

Patter_8

Patter_9

Patter_10

Patter_11

Patter_12

Patter_13

Patter_14

Patter_15

Patter_16

Patter_17

Patter_18

Patter_19

Patter_20

Patter_21

Patter_22

Patter_23

Patter_24

Patter_25

Patter_26

Patter_27

Patter_28

Patter_29

Patter_30

Patter_31

Patter_32

Patter_33

Patter_34

Patter_35

Patter_36

Patter_37

Patter_38

Patter_39

Patter_40

Patter_41

Patter_42

Patter_43

Patter_44

Patter_45

Patter_46

Patter_47

Patter_48

Patter_49

Patter_50

Patter_51

Patter_52

Patter_53

Patter_54

Patter_55

Patter_56

Patter_57

Patter_58

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Patter_61

Patter_62

Patter_63

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Patter_67

Patter_68

Patter_69

Patter_70

Patter_71

Patter_72

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Patter_74

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Patter_76

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Patter_78

Patter_79

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Patter_81

Patter_82

Patter_86

Patter_87

Patter_88

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Patter_92

Patter_93

Patter_94

Patter_95

Patter_96

Patter_97

Patter_98

Patter_99

Patter_100

Patter_101

Patter_102

Patter_103

Patter_104

Patter_105

Patter_106

Patter_107

Patter_108

Patter_109

Patter_110

Patter_111

Patter_112

Patter_113

Patter_114

Patter_115

Patter_116

Patter_117

Patter_118

Patter_119

Patter_120

Patter_121

Patter_122

Patter_123

Patter_124

Patter_125

Patter_126

Patter_127

Patter_128

Patter_129

Patter_130

Patter_131

Patter_132

Patter_133

Patter_134

Patter_135

Patter_136

Patter_137

Patter_138

Patter_139

Patter_140

Patter_141

Patter_142

Patter_143

Patter_144

Patter_145

Patter_146

Patter_147

Patter_148

Patter_149

Patter_150

Patter_151

Patter_154

Patter_155

Patter_162

Patter_170

Patter_172

Patter_173

Patter_184

Patter_185

Patter_186

Patter_187

Patter_188

Patter_189

Patter_190

Patter_191

Patter_192

Patter_193

Patter_194

Patter_195

Patter_196

Patter_197

Patter_198

Patter_199

Patter_200

Patter_201

Patter_202

Patter_203

Patter_204

Patter_205

Patter_206

Patter_207

Patter_208

Patter_209

Patter_210

Patter_211

Patter_212

Patter_213

Patter_214

Patter_215

Patter_216

Patter_217

Patter_218

Patter_219

Patter_220

Patter_223

Patter_224

Patter_225

Patter_226

Patter_227

Patter_228

Patter_229

Patter_230

Patter_231

Patter_232

Patter_233

Patter_234

Patter_235

Patter_236

Patter_237

Patter_238

Patter_239

Patter_240

Patter_241

Patter_242

Patter_243

Patter_244

Patter_245

Patter_246

Patter_247

Patter_248

Patter_249

Patter_250

Patter_251

Patter_252

Patter_253

Patter_254

Patter_255

Patter_256

Patter_257

Patter_258

Patter_259

Patter_260

Patter_261

Patter_262

Patter_263

Patter_264

Patter_265

Patter_267

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet