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Streptomyces phage Peebs
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Detailed Information for Phage Peebs
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found BySierra Smith
Year Found2013
Location FoundPA USA
Finding InstitutionWilkes University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesPhage with long tail
Naming NotesNamed after my cat
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2014
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage4547
Genome length (bp)133047
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11072 bp
End Determination NotesBuildup of reads from Illumina sequencing data.
GC Content50.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes226
Number of tRNAs43
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Peebs_1

Peebs_2

Peebs_3

Peebs_4

Peebs_5

Peebs_6

Peebs_7
(Lsr2 DNA bridging protein)

Peebs_8

Peebs_9

Peebs_10

Peebs_11

Peebs_12

Peebs_13

Peebs_14

Peebs_15

Peebs_16

Peebs_17

Peebs_18

Peebs_19

Peebs_20

Peebs_21

Peebs_22

Peebs_23
(HNH endonuclease)

Peebs_24

Peebs_25
(ThyX thymidylate synthase)

Peebs_26

Peebs_27

Peebs_28

Peebs_29

Peebs_30

Peebs_31

Peebs_32

Peebs_33

Peebs_34
(nucleotidyl transferase)

Peebs_35
(glycosyltransferase)

Peebs_36

Peebs_38
(HNH endonuclease)

Peebs_39
(hydrolase)

Peebs_40

Peebs_41
(glycosyltransferase)

Peebs_42
(ribonucleotide reductase)

Peebs_43
(endolysin, LysM-like)

Peebs_44

Peebs_45

Peebs_46
(portal protein)

Peebs_47

Peebs_48
(capsid maturation protease)

Peebs_49
(major capsid protein)

Peebs_50

Peebs_51

Peebs_52

Peebs_53

Peebs_54

Peebs_55

Peebs_56

Peebs_57

Peebs_58
(tape measure protein)

Peebs_59
(minor tail protein)

Peebs_60
(minor tail protein)

Peebs_61

Peebs_62
(minor tail protein)

Peebs_63
(minor tail protein)

Peebs_64

Peebs_65

Peebs_66

Peebs_67
(HNH endonuclease)

Peebs_68
(metallophosphoesterase)

Peebs_69

Peebs_70

Peebs_71

Peebs_72

Peebs_73

Peebs_74

Peebs_75
(DNA helicase)

Peebs_76

Peebs_77
(DNA primase)

Peebs_78

Peebs_79
(DnaE DNA polymerase III (alpha))

Peebs_80

Peebs_81
(MazG nucleotide pyrophosphohydrolase)

Peebs_82
(RecA DNA recombinase)

Peebs_83

Peebs_84

Peebs_85

Peebs_86

Peebs_87
(RecB exonuclease/helicase)

Peebs_88

Peebs_89
(resolvase, RuvC-like)

Peebs_90

Peebs_91

Peebs_92

Peebs_93

Peebs_94

Peebs_95
(terminase, large subunit)

Peebs_96
(HNH endonuclease)

Peebs_97

Peebs_101

Peebs_104
(nucleotidyl transferase)

Peebs_105
(FtsK DNA translocase)

Peebs_106

Peebs_108

Peebs_109

Peebs_111

Peebs_112

Peebs_113

Peebs_114
(hydrolase)

Peebs_115

Peebs_117

Peebs_118

Peebs_120

Peebs_121

Peebs_122

Peebs_123
(Ro RNA binding protein)

Peebs_124

Peebs_125

Peebs_126

Peebs_127

Peebs_128

Peebs_129

Peebs_130

Peebs_132

Peebs_139

Peebs_140

Peebs_141

Peebs_144

Peebs_145

Peebs_147

Peebs_148

Peebs_150

Peebs_151

Peebs_152

Peebs_154

Peebs_160

Peebs_163

Peebs_164

Peebs_165

Peebs_170

Peebs_171

Peebs_175

Peebs_177

Peebs_178
(exonuclease)

Peebs_180

Peebs_181

Peebs_182
(hydrolase)

Peebs_183

Peebs_184

Peebs_185

Peebs_186

Peebs_188

Peebs_189

Peebs_190

Peebs_191
(RNA ligase)

Peebs_192

Peebs_193

Peebs_194
(polynucleotide kinase)

Peebs_195

Peebs_196

Peebs_198

Peebs_199

Peebs_201

Peebs_202

Peebs_204

Peebs_206

Peebs_207

Peebs_208

Peebs_209

Peebs_210

Peebs_211

Peebs_212

Peebs_213

Peebs_214
(deoxycytidylate deaminase)

Peebs_215

Peebs_216

Peebs_217
(phosphoesterase)

Peebs_218

Peebs_219
(HNH endonuclease)

Peebs_220
(WhiB family transcription factor)

Peebs_221

Peebs_222

Peebs_223

Peebs_224

Peebs_225

Peebs_226

Peebs_227

Peebs_228

Peebs_229

Peebs_231

Peebs_232

Peebs_233

Peebs_234

Peebs_235

Peebs_236

Peebs_237
(thioredoxin)

Peebs_238

Peebs_239

Peebs_240

Peebs_241

Peebs_242

Peebs_243

Peebs_244

Peebs_245

Peebs_246

Peebs_247

Peebs_248

Peebs_249

Peebs_250

Peebs_251

Peebs_252

Peebs_253

Peebs_254
(Lsr2 DNA bridging protein)

Peebs_255

Peebs_256

Peebs_257

Peebs_258

Peebs_259

Peebs_260

Peebs_261

Peebs_262

Peebs_263

Peebs_264

Peebs_265

Peebs_266

Peebs_267

Peebs_268

Peebs_269

Peebs_270
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF347638
Refseq NumberNone yet
Available Files
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload