Microbacterium phage Peppino
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Detailed Information for Phage Peppino
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByGabrielle Gentile
Year Found2016
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.440447 N, 79.951733 W Map
Discovery NotesThis sample was collected on 5.19 at approximately 5:30 PM. It was found next to the side walk on the right of Joncaire Street. The soil was shaded by trees and other foliage. The weather was sunny and 65 degrees Fahrenheit. The soil was dark brown and moist as it was sampled a day after it rained.
Naming NotesThis is the name of a character in one of my favorite French movies, The Chorus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 16, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3124
Genome length (bp)41932
Character of genome endsCircularly Permuted
GC Content63.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEA
SubclusterEA1
Other Cluster Members
Plaque NotesPeppino forms turbid plaques that are 1-2mm in size.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload