Rhodococcus phage Peregrin
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Detailed Information for Phage Peregrin
Discovery Information
Isolation HostRhodococcus erythropolis RIA 643
Found ByKatie Thomas
Year Found2014
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.4452 N, 79.9530 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 8, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent Sequencing
Approximate Shotgun Coverage209
Sanger Finishing Reactions6
Genome length (bp)133006
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length2937 bp
GC Content41.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members

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Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Peregrin_1

Peregrin_2

Peregrin_3

Peregrin_4

Peregrin_5

Peregrin_6

Peregrin_7

Peregrin_8

Peregrin_9

Peregrin_10

Peregrin_11

Peregrin_12

Peregrin_13

Peregrin_14

Peregrin_15

Peregrin_16

Peregrin_17

Peregrin_18

Peregrin_19

Peregrin_20

Peregrin_21

Peregrin_22

Peregrin_23

Peregrin_24

Peregrin_25

Peregrin_26

Peregrin_27

Peregrin_28

Peregrin_29
(lysin B)

Peregrin_30

Peregrin_31

Peregrin_32

Peregrin_33

Peregrin_34

Peregrin_35

Peregrin_36

Peregrin_37

Peregrin_38

Peregrin_39

Peregrin_40

Peregrin_41
(ThyX-like thymidylate synthase)

Peregrin_42

Peregrin_43

Peregrin_44

Peregrin_45

Peregrin_46

Peregrin_47

Peregrin_48
(methyltransferase)

Peregrin_49

Peregrin_50

Peregrin_51

Peregrin_52

Peregrin_53

Peregrin_54

Peregrin_55

Peregrin_56
(HNH endonuclease)

Peregrin_57

Peregrin_58

Peregrin_59

Peregrin_60
(glycosyltransferase)

Peregrin_61

Peregrin_62
(ribonucleotide reductase)

Peregrin_63
(ribonucleotide reductase)

Peregrin_64

Peregrin_65

Peregrin_66

Peregrin_67
(lysin A)

Peregrin_68

Peregrin_69

Peregrin_70
(major tail protein)

Peregrin_71

Peregrin_72

Peregrin_73

Peregrin_74

Peregrin_75
(portal protein)

Peregrin_76
(capsid maturation protease)

Peregrin_77
(major capsid protein)

Peregrin_78

Peregrin_79

Peregrin_80

Peregrin_81
(major tail protein)

Peregrin_82

Peregrin_83
(tail assembly chaperone)

Peregrin_84
(tail assembly chaperone)

Peregrin_85
(tape measure protein)

Peregrin_86

Peregrin_87

Peregrin_88
(metallophosphoesterase)

Peregrin_89

Peregrin_90

Peregrin_91

Peregrin_92

Peregrin_93

Peregrin_94

Peregrin_95
(dsDNA helicase)

Peregrin_96

Peregrin_97
(DNA primase)

Peregrin_98
(ssDNA binding protein)

Peregrin_99
(DNA polymerase III alpha subunit)

Peregrin_100
(DNA polymerase III alpha subunit)

Peregrin_101

Peregrin_102
(nucleotide pyrophosphohydrolase)

Peregrin_103
(RecA-like DNA recombinase)

Peregrin_104
(Holliday junction resolvase)

Peregrin_105

Peregrin_106
(exonuclease)

Peregrin_107
(RuvC-like resolvase)

Peregrin_108

Peregrin_109

Peregrin_110

Peregrin_111

Peregrin_112
(terminase large subunit)

Peregrin_113
(HNH endonuclease)

Peregrin_114

Peregrin_115

Peregrin_116

Peregrin_117
(rIIB-like protein)

Peregrin_118

Peregrin_122

Peregrin_123

Peregrin_124

Peregrin_125

Peregrin_126

Peregrin_127

Peregrin_128

Peregrin_129

Peregrin_130

Peregrin_131

Peregrin_132

Peregrin_133

Peregrin_135

Peregrin_136

Peregrin_137

Peregrin_142
(band-7-like membrane protein)

Peregrin_143

Peregrin_148

Peregrin_149

Peregrin_150

Peregrin_151

Peregrin_152

Peregrin_153
(RNA ligase)

Peregrin_154

Peregrin_155
(RtcB-like RNA ligase)

Peregrin_156

Peregrin_158

Peregrin_159

Peregrin_161

Peregrin_162

Peregrin_163

Peregrin_164

Peregrin_165
(metallophosphoesterase)

Peregrin_166
(phosphoribosyl pyrophosphate transferase)

Peregrin_167
(nicotinate phosphoribosyltransferase)

Peregrin_168

Peregrin_169

Peregrin_170

Peregrin_171
(thioredoxin)

Peregrin_172
(phosphoesterase)

Peregrin_173

Peregrin_174

Peregrin_175

Peregrin_176

Peregrin_177

Peregrin_178
(HNH endonuclease)

Peregrin_179

Peregrin_180

Peregrin_181

Peregrin_182

Peregrin_183

Peregrin_184

Peregrin_185

Peregrin_186

Peregrin_187

Peregrin_188

Peregrin_189

Peregrin_190

Peregrin_191
(CMP deaminase)

Peregrin_192

Peregrin_193

Peregrin_194

Peregrin_195

Peregrin_196

Peregrin_197

Peregrin_198

Peregrin_199

Peregrin_200
(WhiB family transcription factor)

Peregrin_201

Peregrin_202

Peregrin_203

Peregrin_204

Peregrin_205

Peregrin_206

Peregrin_207

Peregrin_208

Peregrin_209

Peregrin_210

Peregrin_211

Peregrin_212

Peregrin_213

Peregrin_214

Peregrin_215

Peregrin_216

Peregrin_217

Peregrin_218
(DNA methyltransferase)

Peregrin_219
(DNA methyltransferase)

Peregrin_220
(phosphatase)

Peregrin_221

Peregrin_222

Peregrin_223

Peregrin_224

Peregrin_225

Peregrin_226

Peregrin_227

Peregrin_228

Peregrin_229

Peregrin_230

Peregrin_231

Peregrin_232
(HNH endonuclease)

Peregrin_233

Peregrin_234

Peregrin_235

Peregrin_236

Peregrin_237

Peregrin_238

Peregrin_239

Peregrin_240

Peregrin_241
(tRNA nucleotidyltransferase)

Peregrin_242

Peregrin_243

Peregrin_244

Peregrin_245

Peregrin_246

Peregrin_247

Peregrin_248

Peregrin_249

Peregrin_250

Peregrin_251

Peregrin_252

Peregrin_253

Peregrin_254

Peregrin_255

Peregrin_256

Peregrin_257

Peregrin_258

Peregrin_259

Peregrin_260

Peregrin_261

Peregrin_262

Peregrin_263

Peregrin_264

Peregrin_265

Peregrin_266

Peregrin_267

Peregrin_268

Peregrin_269

Peregrin_270

Peregrin_271

Peregrin_272

Peregrin_273

Peregrin_274

Peregrin_275

Peregrin_276

Peregrin_277

Peregrin_278

Peregrin_279

Peregrin_280

Peregrin_281

Peregrin_282

Peregrin_283

Peregrin_284

Peregrin_285

Peregrin_286

Peregrin_287

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH153807
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 96
Pitt Freezer Box Grid# H1
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload